KEGG   Marivivens sp. JLT3646: BSK21_02500
Entry
BSK21_02500       CDS       T04589                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
don  Marivivens sp. JLT3646
Pathway
don03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:don00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSK21_02500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:don03019]
    BSK21_02500
Enzymes [BR:don01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BSK21_02500
Messenger RNA biogenesis [BR:don03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BSK21_02500
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: APO86007
UniProt: A0AA34X038
Position
489970..491307
AA seq 445 aa
MDFDMLGLAPRLVTKLAELGITDPTPIQAQAIPHAMNGRDVMGLAQTGTGKTAAFGLPML
DALMKNGDKPSPKTTRALILAPTRELAKQIADSLSAFSSGSHLKTVLVVGGAGITGQSRR
LEKGTSILVATPGRLLDLIDRGAVRLDETQFLVLDEADQMLDLGFIHALRKIATLIPKER
QTMLFSATMPKQMAELAESYLSNPIRVQVNPPGQAAEKIDQCIHFVAKAAKTDLLIELLD
AHRDELALVFGRTKHGMEKLSRVLESKGFAVASIHGNKSQGQRDRAIKDFKEGKVRVLVA
TDVAARGIDIPGVRHVYNYELPNVPDQYVHRIGRTARAGAAGSAVAFCAPDEMSDLRDIE
KTLKTTIPVASGRPWEVVGNEPKRKPAGNGRGGPRRFGNKGSGGAGKPKGDRPAFGKPAG
DRPSFAKPAGGGQRRRKPQGNRAAG
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggacttcgatatgctggggctcgccccccgccttgtgactaaacttgccgaactcggc
attactgaccccaccccgattcaagcgcaggccatcccgcacgcgatgaacggtcgcgac
gttatgggccttgcgcaaacgggcacgggcaaaaccgctgctttcggtctgccgatgctc
gacgcgttgatgaaaaacggtgataagccttcgccgaaaaccactcgtgcgctgatcctc
gcgccgacccgtgagcttgctaaacagattgcggatagcttgtctgcgttttcgtctggc
tcgcaccttaagaccgttctcgtcgtcggtggcgcagggatcacgggccaaagtcgtcgc
ctagaaaagggtacgtctattctcgtcgcgacccctggtcgtttgcttgacctgatcgac
cgtggtgctgttcgtctcgatgagacacagttcctcgttctggatgaggccgatcagatg
ctcgacctcggctttatccacgcgctgcgcaaaatcgcgacgctgatccccaaagagcgt
caaaccatgctgttctcggcgaccatgccgaagcagatggctgaattggccgaaagctac
ttgtccaacccgatccgcgttcaggtgaaccctccgggtcaagcagcagaaaagattgat
cagtgcatccactttgttgcgaaggctgcaaaaaccgatctgttgatcgagctgttggac
gcacaccgcgacgagttggcgcttgtgtttggccgtaccaaacacgggatggagaaactc
tctcgtgttctcgaaagcaaaggctttgctgtcgcttcgatccacgggaacaaatcccaa
ggtcagcgtgaccgtgcgatcaaggacttcaaagaaggcaaggtgcgcgtgcttgtggca
accgatgttgctgcccgtggcatcgacattcctggcgtgcgtcacgtttataactacgaa
ttgccgaacgtgcctgaccaatacgtgcaccgtattggccggacagcgcgcgcgggtgcc
gctggttctgcggttgccttctgtgcgcctgacgaaatgtcggatctgcgcgatattgag
aagacactcaaaacgacaatcccagtcgcgtcgggtcgtccgtgggaggttgtcggcaac
gagccgaaacgcaaacccgctggcaatggccgtggtggtccgcgtcgctttggcaacaaa
ggcagcggcggtgctgggaagcccaaaggggatcgtccggcatttggcaaacccgcaggc
gaccgtccgtcgtttgctaaaccggcagggggcggccagcgtcgtcgcaagccccaaggc
aatcgcgccgcaggataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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