KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0845700-01
Entry
Os03t0845700-01   CDS       T02163                                 
Symbol
Os03g0845700
Name
(RAP-DB) Similar to RPB17 (Fragment).
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os03t0845700-01 (Os03g0845700)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os03t0845700-01 (Os03g0845700)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os03t0845700-01 (Os03g0845700)
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os03t0845700-01 (Os03g0845700)
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Os03t0845700-01 (Os03g0845700)
  RNA polymerase III system
   RNA polymerase III
     Os03t0845700-01 (Os03g0845700)
  RNA polymerase I system
   RNA polymerase I
     Os03t0845700-01 (Os03g0845700)
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Os03t0845700-01 (Os03g0845700)
SSDB
Motif
Pfam: RNA_pol_Rpb8 BRD4_CDT
Other DBs
RAP-DB: Os03t0845700-01
Position
chr03:complement(join(35564714..35564786,35564026..35564183,35563729..35563832,35563079..35563190))
AA seq 148 aa
MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL
VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG
LLVMLKGDPSSAANFELDQRLFLLMRKV
NT seq 447 nt   +upstreamnt  +downstreamnt
atggccgagtttctcttcgaggacatcttcactgtcaccaggctcgaccctgatggcaag
aagtttgacagagtttctcgtatcgaagctcgcagtgaccagttcgatatgtacatgcag
ttagatgttgccacagatgtctatcctatgcatccaggtgacagatttaccatggtcttg
gttcctactttgaacttagatggtaccccagatagcgccttctttacacaggctggcagg
aaaactctggctgacaaatatgagtatgtcatgcatgggaagctttataagatctcagaa
gacaaagacacctctgatcaaaatgctaaaaaagtggagatgtatgcatcatttggtggc
ctcctagtgatgcttaagggtgatccctccagtgctgcgaattttgagctggaccagagg
ctgttcctacttatgcgcaaggtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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