KEGG   Dinoponera quadriceps: 106741174
Entry
106741174         CDS       T05610                                 
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
dqu  Dinoponera quadriceps
Pathway
dqu03030  DNA replication
dqu03410  Base excision repair
dqu03420  Nucleotide excision repair
dqu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106741174
   03410 Base excision repair
    106741174
   03420 Nucleotide excision repair
    106741174
   03430 Mismatch repair
    106741174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dqu03032]
    106741174
   03400 DNA repair and recombination proteins [BR:dqu03400]
    106741174
DNA replication proteins [BR:dqu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106741174
DNA repair and recombination proteins [BR:dqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106741174
SSDB
Motif
Pfam: RFC1 AAA BRCT Rad17 AAA_22 AAA_30 DNA_pol3_delta AAA_14 AAA_5 BRCT_2 RuvB_N AAA_16 AAA_6 RNA_helicase AAA_7 AAA_18 PTCB-BRCT AAA_assoc_2 AAA_19 AAA_33
Other DBs
NCBI-GeneID: 106741174
NCBI-ProteinID: XP_014468374
UniProt: A0A6P3WRL1
Position
Unknown
AA seq 1062 aa
MPRVSNKNGANTAKDIRSYFAPVANSQTSSKFAPKPKKKRVISSDEDEEKPQSSAKRSKI
VQKTRRNLSILSDSEDDMINDKKDSDQSKACTSGNKKSLKVFSGDLFGNKPVTRIEEARV
NRKLQEMESEFHNDADFEAVLSKLDMSQNIQNTKEEKGSIKNADISGNLETTVTKTEVGH
NNSKKGKRKSFSLHNEINKGKLHNETNKTNKLKTKEVKSPNKDINTYSKTVISSPPKRKQ
QSEGKVGFGSNESPNTNDKHTDNVSKKFKNMPNITTSASKHEDIEKQSSNKKKAKETVLF
ELRIEMKKQRSILYEKYLQRGGARNPGSKTIPTGAKNCLAGLSFLLTGVLDSLERNEAED
LIRNYGGRTVNSVSSKVNYVIVGDEAGPAKLAKANSLGIEQISEDNLLEMIRTRPEGRAE
DIKPATTRAKPKKVLNKSESDTSPSPSETKALSSLMNKTKALSSPSPVKTEVPVVSLKKE
TSTISSSVPKQESNISDGSQKTITNISSQLLVEKYRPKTLKQIIGQQGDRSSAHNLYNWL
RDWHKNRQDSKSKDASSKQSSGQNFKAALLSGPPGVGKTSTVQIVCKDLGYDLLEFNASD
TRSKTLLKEEISGLLSNTTLKHYFADNNQKTTSKHVLVMDEVDGMAGNEDRGGLQELVNL
IKHTEIPIICICNDRSNVKMRTLSCHSYDLKFPKLRVEQIRSSMMSLCYKENISISTDDL
DQLIESTNHDIRQVINHLEFFGGRTTRGGQAAGKKHANKNFKLGAFDVAKMVFNASQQRD
TTLNDKIGLYFHDYNIAPLFVQENYPAVKLSQVSPLQRLERIARTADSISQGDLVEKVMR
SGMTWSLLPLHACFSFIIPGSEMSGSLDAMVRFPGWFGRNSKATRFNRLMQELTTHTRLA
TGASKDAVNLDYMLHIRNAVVKPLIDNGTDGIEAAIAVMGKYHLMREDLDSMMEITLWPG
VRNSMSNLDSKVKAAFTRAYQKNPPMLPYAVNSGSTVKKKSVRDDDNDLVDEEESEEEEG
KIDSDAMIKIKKPTASTSKTAAVTKRTGEPVKKRGKRRGRAK
NT seq 3189 nt   +upstreamnt  +downstreamnt
atgccgcgggtgagtaataaaaatggagccaacactgctaaggatataagatcctatttt
gcgccagtcgcaaattcccagacgagcagtaaatttgctccgaaacctaagaaaaaacgt
gtgatctcatcagacgaagatgaagagaaaccacaatcatctgcgaagcgctctaagatt
gtacaaaaaacgaggagaaatttatcaatcttatcggactctgaggatgatatgattaat
gataagaaggattctgaccaatctaaagcatgtaccagtggaaataaaaaatcgcttaaa
gtgttttctggtgatttatttggtaataaacctgtaacaagaatagaagaagcaagagta
aatagaaaattacaggaaatggaatctgagtttcacaatgatgctgactttgaagctgtg
ctgagtaaattggatatgtcccagaatatacagaacacaaaggaagaaaaaggtagcatt
aaaaatgcagatatctcgggcaatcttgaaacaacagtaacaaaaacagaagtaggccat
aataatagcaagaaaggaaaacgcaagagtttctcattacataatgagataaataaaggg
aaattacataatgagacaaataaaacaaacaaattaaaaactaaggaggtgaaatctccc
aataaagatattaatacatattcaaagactgttataagttctcctccaaaacggaagcag
caaagtgaggggaaagttggttttggttcaaatgaaagcccaaatacaaacgataagcat
actgataatgtgtccaaaaagttcaagaatatgccaaatatcactacttctgcttcaaaa
catgaagatatcgagaaacaatcatcgaataagaagaaagctaaagaaacggttctcttt
gagttaagaatagaaatgaaaaaacaacgttccatactatatgagaagtatcttcagaga
ggcggcgccagaaatcctggttcaaagacgattcctacaggcgctaagaactgtttagct
ggtttaagcttcttgctcacaggcgtcttggattccttagaaaggaatgaagccgaagat
ttaatacggaattacgggggccgaacggtaaactctgtatcaagtaaagtgaactacgtc
atagtgggagatgaagctggtccggctaaattggcaaaggctaacagtttaggtatcgag
caaatatccgaggacaatctcttagaaatgatacgtacgagaccggaaggcagagctgaa
gatatcaagccagccacgacaagagcaaagccaaaaaaggtattgaacaagtctgaaagt
gatacatcgccatcgccgagcgaaacgaaagcactgtcgtcattgatgaacaaaacgaaa
gcactgtcatcgccgtcaccggtcaaaaccgaagtaccagtagtttcacttaagaaagaa
acttccacaatttcatcgtcagtaccgaagcaggagtcaaatataagtgatggatcgcag
aagacaattacaaatatcagctcacaactgttggtcgaaaagtacagacctaaaactttg
aaacaaatcataggccagcaaggagacaggagctccgcgcacaatttgtacaattggctg
cgcgattggcacaagaatcgccaggattcaaaatccaaagatgcctcgagcaagcaaagc
agcgggcagaatttcaaagcagccttgctgtctggtccaccaggcgttggtaaaacatcg
actgtacagatcgtttgcaaagatttggggtacgatctcttagagttcaacgcttccgac
acgagaagcaaaacgctcctgaaagaagagatctcgggactgttgtcgaacaccacattg
aaacattacttcgcagacaacaaccaaaagaccacgagcaagcacgtattggtgatggac
gaagtcgacggtatggctggcaacgaggatcgcggtggcttgcaggagttggttaatttg
atcaaacataccgagataccgattatctgcatatgcaacgaccgatctaacgtgaaaatg
aggaccctctcctgccacagttacgatctgaagtttccgaaactccgagtggagcagatc
agaagctcgatgatgtccctgtgctataaagagaacatcagcatctcgactgacgatctc
gatcagctgatcgagtcgacgaatcacgacattcgacaagtgatcaatcacttggagttc
ttcggcgggaggacgacgcgcggcggacaggcggccggcaaaaagcacgccaacaagaac
ttcaaactcggcgcgttcgacgtcgcgaagatggtctttaatgcatcgcagcagagggac
accactctgaacgacaagatcggcctgtatttccacgattataacatagcgcctcttttc
gtgcaagaaaattatcccgccgtcaaactgtcacaagtgtcacctcttcagaggctagag
aggatcgctcgcacggccgacagtatatcgcagggggacctcgtcgagaaagtgatgagg
agcggcatgacgtggagtctgctgccgttgcacgcctgtttctcctttattataccgggc
agtgaaatgtcggggagtcttgacgcgatggtgcggttccccggctggttcggacggaat
tcgaaagctacgagattcaataggctgatgcaagagttaacgacgcacacgcgattagcc
acgggcgcgagcaaagacgccgtaaatttagattacatgctccacatacggaacgcggtt
gtgaagcctttgatagacaacggcacggacggtatagaagcggcgattgccgtcatggga
aaatatcatctaatgagggaggacttggattcgatgatggaaatcaccctctggccaggt
gttcgtaattccatgagtaatcttgacagcaaggtgaaagcagcgtttactagggcgtat
cagaagaatcctccaatgttgccgtatgcagttaacagtggtagtacagtaaagaaaaaa
tctgtgcgagatgatgacaatgatttagtggatgaggaagaatccgaagaggaggaaggc
aagatcgattctgacgcaatgattaagataaagaaacctactgcctccaccagcaagact
gctgcagtaaccaagagaaccggcgaaccagttaagaagcgcggaaagagacgtggaaga
gcaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (20)   
   Pfam (20)   
All databases (37)   

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