KEGG   Danio rerio (zebrafish): 102725539
Entry
102725539         CDS       T01004                                 
Symbol
glis2b
Name
(RefSeq) zinc finger protein GLIS2b
  KO
K09233  zinc finger protein GLIS2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    102725539 (glis2b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    102725539 (glis2b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 GLI-like
    102725539 (glis2b)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   102725539 (glis2b)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_6 zf-C2H2_4 zf-C2H2_8 Zap1_zf1 zf-met FOXP-CC
Other DBs
NCBI-GeneID: 102725539
NCBI-ProteinID: NP_001276814
ZFIN: ZDB-GENE-091204-120
Ensembl: ENSDARG00000100232
UniProt: T1WQU8
Position
3:12239689..12341964
AA seq 489 aa
MLSLDEPLDLKVPRGWISGRDRGARSPPTLSSSPIHGKGAGQLRMADDGTAVIVPASPAS
PHTGVLRSNSETPTPPAVDLSLSPSSRNTACSPELSNGSGSAPVFPGDSAHIRYVEGGAT
SQAFQFFVPIGAGGGLHLPSSMFIRQPKDTRASPDLSADEQLACRWRKCHLLFDSLQDLV
DHVNDFHVKPEKDSGYCCHWEGCARKGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSR
LENLKIHNRSHTGEKPYICPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMVGCLKRYTD
PSSLRKHIKAHGHFVAQEQGGGVGSLIKQSQIAGVGKDSELTYVSGAHIIIPSAAAALLG
GHALQGLGGSLPLSPLSPRPLDLSTLGCPNSPTAGLGGTPILSFSSSPLGLTKSPLLSPS
FSSSTLGLPMLPILGSERRDHGKGKIRGEEGEDEIHGGVLNLSTGASHDPLSWVVIPSGP
VVLKPAVVN
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgctgtccttagacgagccactggacctgaaggtgccgagggggtggatcagtgggcgg
gacagaggcgccaggtcaccgcctactctcagttcctctccaatccatggcaagggggcg
gggcagctgcggatggcagacgacggcactgcagtcatcgttccagcgtcccctgcatcg
ccacacacaggtgtcttacggagtaactcggagacccccacaccaccggctgtggacctc
agcctgtccccgtcctcccgaaacactgcctgctccccagagctctccaacggcagtgga
tcagctcctgttttccccggggactcagctcatatccgctatgttgaaggaggagccaca
tctcaagcattccagttctttgtgcccatcggagcaggaggaggccttcacctgccctcg
tccatgtttattcggcagcctaaagacaccagagcttctccagatctttccgcagatgaa
cagctggcctgtcgctggaggaagtgccacctacttttcgactccttgcaagacctggtg
gatcatgtcaacgacttccatgtgaagccagagaaggattctggctactgttgccactgg
gaagggtgtgcacgcaaaggacgggggtttaatgccaggtacaagatgctgattcacatc
cgtactcacaccaatgagaaacctcaccgctgtcccacctgcaataagagcttctcccga
ctggaaaacctcaagattcacaaccgctcacacacaggtgagaagccctacatctgccct
tacgaaggctgcaataaacgatactccaattccagcgaccggttcaaacacacacgcacg
cactatgtggacaagccctactactgcaagatggtgggatgcttgaaacgctacacggac
cccagctccctgaggaagcatatcaaggctcatgggcactttgtagcccaggagcaggga
ggtggggtgggctcgttgataaagcagagccagattgctggggtggggaaagattcggag
ctgacttatgtcagcggggctcacatcatcattcctagtgctgccgctgctctccttggt
ggtcacgctctgcagggtctcggaggctccctcccgctgtcccccctcagtccccgcccc
ttggacttgagcacacttggctgcccaaactcccctactgctgggcttggagggacacct
attctgtccttcagcagttcccctctaggcctgaccaagtcacctttgctgtctccttcc
ttttcatcttctacgcttgggttacccatgctgcccatcctgggctctgagcgcagggac
catggcaagggcaagatcagaggagaggagggcgaggatgagatccacggtggtgtactc
aacctgtctacgggagcatcccacgaccccctgtcttgggtggtcatcccctctggccca
gttgtgctgaagccagctgtggtcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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