KEGG   Danio rerio (zebrafish): 30355
Entry
30355             CDS       T01004                                 
Symbol
apoa1a
Name
(RefSeq) apolipoprotein A-Ia precursor
  KO
K08757  apolipoprotein A-I
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03320  PPAR signaling pathway
dre04977  Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    30355 (apoa1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    30355 (apoa1a)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   30355 (apoa1a)
SSDB
Motif
Pfam: Apolipoprotein Baculo_PEP_C BAR_3 ApoLp-III Exonuc_VII_L Gp-FAR-1 CC_BshC V-ATPase_G DUF5856 DUF29 FliD_C DUF445 DUF6918 T4_Rnl1_C Prominin DUF7605 PIN_8 ATP-synt_DE DUF1690 Gp58 CTD11 DUF4047 FUSC
Other DBs
NCBI-GeneID: 30355
NCBI-ProteinID: NP_571203
ZFIN: ZDB-GENE-990415-14
Ensembl: ENSDARG00000012076
UniProt: O42363
Position
5:37978512..37981518
AA seq 262 aa
MKFVALALTLLLALGSQANLFQADAPTQLEHYKAAALVYLNQVKDQAEKALDNLDGTDYE
QYKLQLSESLTKLQEYAQTTSQALTPYAETISTQLMENTKQLRERVMTDVEDLRSKLEPH
RAELYTALQKHIDEYREKLEPVFQEYSALNRQNAEQLRAKLEPLMDDIRKAFESNIEETK
SKVVPMVEAVRTKLTERLEDLRTMAAPYAEEYKEQLVKAVEEAREKIAPHTQDLQTRMEP
YMENVRTTFAQMYETIAKAIQA
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaaattcgtggctcttgcactgactcttctcttggccttgggttcccaggccaatttg
ttccaggctgatgccccgacccagctggagcactacaaggcagcagccttggtgtacctg
aaccaggtcaaggatcaggctgagaaagcccttgacaacctggacggaaccgactatgag
cagtacaaactccagctttctgagagcctgaccaagctccaggaatatgcccagaccacc
tcccaggctttgaccccctacgccgagaccatctccacccagttgatggagaacaccaag
cagctgcgcgagagggtcatgactgacgttgaggatctccgatccaagctggagccccac
cgtgccgagctgtacaccgcgctgcagaagcacatcgatgagtaccgtgagaagctggag
cccgtcttccaggagtactccgctctgaaccgccaaaatgctgagcagctgcgtgccaag
ctggagcccctgatggacgacattaggaaggccttcgagtccaacattgaggaaaccaag
tccaaagttgtgccaatggtcgaggctgttcgcactaagctgaccgagcgtcttgaggac
ctgaggaccatggctgccccctatgccgaggagtacaaggagcagctggtaaaggctgtc
gaggaggccagggagaagatcgctccacacacccaggacctccagactcgcatggagccc
tacatggagaacgtgaggaccacattcgcacagatgtatgagaccatcgccaaggccatc
caggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (23)   
   Pfam (23)   
All databases (64)   

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