KEGG   Danio rerio (zebrafish): 378965
Entry
378965            CDS       T01004                                 
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
  KO
K25805  protein fem-1 homolog A/C
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    378965 (fem1c)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Target recognizing subunit
     378965 (fem1c)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 TPR_12 TPR_2 TPR_10
Other DBs
NCBI-GeneID: 378965
NCBI-ProteinID: NP_937788
ZFIN: ZDB-GENE-031008-3
Ensembl: ENSDARG00000102147
UniProt: Q7T3P8
Position
8:complement(423393..425258)
AA seq 618 aa
MDLKTAVFNAARDGKLKLLQKLLENKSDREVLKLMAEKTNGATPLLMASRYGHLELVEFL
MECCCAPVELGGSVNFDGEVIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLDIVRYLVEHQADLEVANRHGHTCLMISCYKGHREIAQFLLEKGADVNRRSV
KGNTALHDCAESGSLEIMKMLLKFGASMEKDGYGMTPLLSASVTGHTNIVDFLTAHPQTG
LAERISALELLGATFVDKKRDLLGALQYWKRAMELRHSEADCMRREEPLEPEPAYDCSRE
VSTAEELDGLIADPDDMRMQALLIRERILGPAHPDTSYYIRYRGAVYADSGNFERCIRLW
KYALDMQQSNLEPLSPMTASSLLSFAELFSFMLQDRAKGLLGAGVSFQQLMEILCRSVLE
IERAVKQPRPSPDPDPAQLSKLLSIILHLICLLEKLPCSPEQDQHKKETIYRFLKLQACG
RNGFSPLHLAVDHNTTCVGRYPVCKFPSLQVASVLLECGADVNSRDLDDNSPLHVAASNN
HPDIMKLLISGGTHFDSTNALQQTACDLLDHTQLAKSLIQPINHTTLQCLAARAIIRHRL
VYRGSIPERLEAFVLLHR
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggatctgaagaccgcagtcttcaacgccgcccgcgacggcaagctgaagctgctgcag
aagctgctggagaacaagagcgaccgcgaggtgctgaaactgatggcggagaagaccaac
ggagccacgccgctgctgatggcgtcccgctacgggcacctggagctggtggagttcctg
atggagtgctgctgcgcgcccgtggagctcggcggatccgttaacttcgacggtgaggtg
atcgagggcgcgccgccgctgtgggccgcctccgctgcaggacacctgaaggtggtgcag
tctctgctgggccacggagcctccgttaacaacaccaccctcaccaactccaccccgctg
cgcgccgcctgcttcgacggacatctggacattgtgcgctacctggtggagcaccaggcg
gaccttgaggtggcaaaccggcatgggcacacctgcctgatgatctcctgctataaaggc
caccgtgagatcgcacagttcctgctggagaaaggagccgacgtcaaccgcaggagcgtc
aaaggaaacaccgctctacacgactgcgcagaatcggggagcctggagatcatgaagatg
ctgctgaagttcggcgccagcatggagaaggacggctacgggatgacgccgctgctgtcg
gccagcgtgacgggtcacaccaacatcgtggacttcctgacggcgcacccgcagacgggc
ctggcggagcgcatcagtgcgctggagctgctgggagccacgtttgtggacaagaagcgt
gacctgctgggggcgctgcagtactggaagcgggcgatggagctgcggcacagcgaggcc
gactgcatgcggagggaggagccgctggagccggagccggcgtacgactgcagccgagag
gtgtcgacggcggaggagctggacgggctgatcgcagaccccgatgacatgcgcatgcag
gcgctgctgatccgcgagcgcatcctgggccccgcccaccccgacacctcctactacatc
cgctaccgcggcgccgtctacgccgactcggggaacttcgagcgctgcatccggctgtgg
aagtacgcgctggacatgcagcagagcaacctggagccgctgagccccatgaccgccagc
agcctgctgtccttcgccgagctcttctccttcatgctgcaggaccgagccaaaggcctg
ctgggcgccggcgtgtccttccagcagctgatggagatcctgtgccgcagcgtgctggag
atcgagcgcgccgtcaagcagccgcggcccagccccgaccccgacccggcgcagctcagc
aagctgctgtccatcatcctgcacctgatctgcctgctggagaagctgccgtgctcgccg
gagcaggaccagcacaagaaggagaccatctaccgcttcctgaagctgcaggcctgcggg
aggaacggcttcagcccgctgcacctggccgtggaccacaacaccacctgcgtgggccgc
taccccgtctgcaagttcccgtcgctgcaggtggcgtcggtgctgctggagtgcggagcg
gacgtcaacagccgagacctggacgacaacagcccgctgcacgtggcggcgtccaacaac
cacccggacatcatgaagctgctgatctccggcgggacgcacttcgacagcaccaacgcc
ctgcagcagacggcctgcgacctgctggaccacacgcagctggccaagagcctgatccag
cccatcaaccacaccacgctgcagtgcctggcggcccgcgccatcatccggcaccggctg
gtgtaccgcgggagcatcccggagcggctggaggcgttcgtgctgctgcacagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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