KEGG   Danio rerio (zebrafish): 393587
Entry
393587            CDS       T01004                                 
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    393587 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   393587 (lrfn1)
SSDB
Motif
Pfam: LRR_8 Ig_3 I-set LRR_4 fn3 LRR_5 Ig_2 ig LRR_9 Sp38
Other DBs
NCBI-GeneID: 393587
NCBI-ProteinID: NP_956909
ZFIN: ZDB-GENE-040426-1227
Ensembl: ENSDARG00000027602
UniProt: Q6PGX3
Position
15:45994123..46132191
AA seq 742 aa
MERLVFCVLVFGALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTD
NFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLK
GLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKTSSSSRLTVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHQVTKPYV
MEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVHVHMIPLPLLVNNTGHMREADPGLSDISTSSRSSSNDSKTHSKRVLVE
NLTAHSAVIHWPSERHIPGIRMYQIQYNSTVDDTLVYRMIPSASKTFRINDLAAGREYEL
CVLAVYDDGITSLTATRVVGCVHFHTLPETNQCRFVPSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKAYSGGGGDTAKAKAGGDVSVHVHSQTNGSRSAATKQSEEPPESPAGKHCKA
LVLLKMMEDPQEELKVELPALCSAKPPSSRRASLAGPPSDDTQTDSSLTGSTMSLCLIGS
VPNEGPRKGPLANMSLLPSELARTRHRFSFDGDYALFQSHSYPRRARTRRHKSSSQINTD
TSPPCSRRVTFSSTEWMLESTV
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggagaggctggtgttttgtgtgctggtgtttggtgcgctggcgaaggctcagctctgt
ccaggccgctgcatctgtcagaccatctcccccacactcaccctcctgtgcgccaaaacc
ggtctgctgttcgtgccgcccaccgtcgaccgcaaaaccgtggagctgcggctcacagac
aacttcatcacggccgtgcgcaggaaagactttctgaacatgaccagtttagtgcatctg
acgctctccagaaacaccatcagccagatcgcgccgcacgctttcatgggcctcaaatcc
ctgcgcgctttgcacatggacgggaaccgcctcagcgtcatcaacagcaaccaactcaaa
ggcctgatgaacctcagacacctgattttaggaaacaaccagatccaccacattgaagag
tcctcctttgacgagttcgtcgccaccatcgaggatctggatttatcctacaacaacctg
cggactttaccatgggaagccatcgctcgaatgactaacataaacacgctgaccttggac
cacaacctgatcgaccacatcggtgtgggcacgttcacgctgctcaccaaactagtgcgt
ctggacatgacctccaacaggctgcagactctccctccggacacgcttttccagcacgcg
caggttctgtccgagcccaagacttccagctcgtccaggctgacggtcagcttcggggga
aaccctctgcactgtaactgcgagctgctatggctgagacggctgacccgagaggatgat
ctggagacttgtgcttctcctgaacacctgatggacaaatacttctggtccattcaggag
gaggagttcatctgtgagccgccgctcatcaccaaacaccaggtcaccaagccgtatgtg
atggagggtcagggcgtgactctgaagtgtaaagccatgggtgaccctgatcccgcaatc
cactggcgcttcccggacggcaaactggtgcacaacaactcccgcaccattttatacgac
aacggcacgctggacatcctgatcaccacactgaaggacagcggtgcctttaactgcgtg
gcgtctaatgctgcgggcatcgccaccgctgccgtacatgtacacatgatcccgctaccc
ctgctggtcaacaacacaggccacatgcgggaggctgacccaggactctccgacatcagc
acctcctccaggtccagcagcaacgacagcaaaacacacagcaagagggtcctggtggag
aatctgaccgctcactccgccgtcatacactggccctcagagagacacattcctggcatc
cgcatgtaccagatccagtacaacagcactgttgatgatacactcgtctacaggatgatt
ccgtcagccagtaagacgttcaggatcaacgatctggctgcgggccgcgagtacgagctg
tgcgtgttagcggtgtatgacgacggcatcacgtcgctgacggcgacgcgcgtggtgggc
tgcgttcacttccacactctgccggagactaaccagtgccgcttcgtgcccagccagttt
ctgggaggaaccatgatcatcatcatcggcggcatcatcgtggcctccgtgctggtcttc
atcatcatccttatgatccgctataaagcctacagcggcggtggaggagacacagctaaa
gctaaagctggaggagacgtcagtgttcatgtgcactcgcagaccaacggcagcagatcc
gcagccaccaaacagagcgaagagccgcccgagtcgcccgccgggaaacactgcaaggcc
ctggtgctcctcaaaatgatggaggatccgcaggaggagctgaaggtggagctgccggct
ctgtgctccgctaaacctccgtcctccaggagagccagtctggccggacctccatccgac
gacacgcagacggacagcagcttgaccggctccaccatgtccctgtgtctgatcggctcc
gtcccgaacgagggccctcggaagggtccgctggccaacatgtcacttctgcccagtgag
ctggcgcggactcggcaccgcttctcctttgacggagactatgctttattccagagccac
agttacccacggcgggctcgaacccgcagacacaagtccagctcccagatcaacacggac
acatcgccgccctgcagccgcagagtgaccttcagcagcaccgagtggatgctggagagc
acagtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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