KEGG   Danio rerio (zebrafish): 432387
Entry
432387            CDS       T01004                                 
Symbol
pkd2
Name
(RefSeq) polycystin-2
  KO
K04986  polycystin 2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    432387 (pkd2)
   04040 Ion channels [BR:dre04040]
    432387 (pkd2)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   432387 (pkd2)
Ion channels [BR:dre04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   432387 (pkd2)
SSDB
Motif
Pfam: PKD_channel Polycystin_dom Ion_trans Fer4_24 EF-hand_1 EF-hand_7 CNNM
Other DBs
NCBI-GeneID: 432387
NCBI-ProteinID: NP_001002310
ZFIN: ZDB-GENE-040827-4
Ensembl: ENSDARG00000014098
UniProt: Q6IVV8
Position
1:50538497..50557185
AA seq 904 aa
MSSSRVRPQAPQSPAASASASPPPHEGIEMEKMHHEEVGLGVPDETPSSPPTSSSRQAWS
RDNPGFEPEEGMMEADWPPESQGRRSVSTTSSSSSGGVPGNFSGISARINRGLYPTPPAQ
EHRSCGKRILEKMRVLWDTRLLGESNSNREMYLKTVLREMITYILFLLTLCIITYGMVST
NMYYYTKVMSQLFLDTPLSSGEPTNFKSLSTMEDFWKFTEGPFLNGMYWELWYNNKSLPE
NQSLIYYENLLLGVPRLRQLRVRNESCSVHEDLRDEVYDCYNVYSPANEDKAPFGPKNGT
AWRFKDESSLGESSYWGQVSTYGGGGYYQDLSRTREKSANQLQELKNNLWLDRGTRAVFL
DFSIYNGNVNLFCIVRLLVEFPATGGAVPSWQFQTVRLLRYVSSWDYFVGMCEVSFCLFV
LYYLVEEALEIRLHRLRYFKSLWNCLDVLIVALSVPAIIMNICRTSAVSHRLHFLLENHS
TYPNFEPLARLQVHFNNLAAIIVFLSWVKLFKFINFNKTMNQLSTTMSRCAKDLMGFAIM
FFIVFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRIILGDFDFSEIEEADSVLGPIYFTT
FVFFIFMILLNMFLAIINDTYSEVKADMAQQRSEMEITDLIKKSYNRAMVKLKLKKSSIN
DIPDSLQQAAGKLSFDELRQDLRGKGHSDAEIEAIFAKYDLDGDQELTEHEHQQMRDDLE
KEREDLDLEHSSLPRPASGRSFSRSQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLV
RRVDRMEHSIGSIVSKIDAVIVKLEAMERAKMKRRDVLGRILDGVMEDERMGRDPELQRE
QMDRLVRDELERWESDDTMSQVSHHHHQATPIISSAQLRPRSSRPPSSLSNEGPDAAASG
PAHL
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgagctccagtcgcgttcgtcctcaagcgccgcagagcccggcggcatctgcatccgca
tctcctccaccgcatgaaggcatcgagatggaaaaaatgcatcatgaagaagtgggcctc
ggagtgcccgatgagaccccctcctctccgccaacctccagctccagacaggcatggagc
cgggacaatcctgggttcgagccggaggaggggatgatggaggcggactggcccccggag
agtcagggccggaggtctgtgtccacgacgtccagcagcagcagcggcggcgtcccaggg
aacttctccggtatcagtgcgcggatcaacagaggactttacccgactcctccagcacaa
gagcaccgcagctgtgggaagaggatactggagaaaatgagagtgttgtgggatactcgt
cttttgggtgagagcaacagtaacagagagatgtacttgaaaacggtcctgcgagaaatg
atcacctacatcctcttcctgctcaccctctgcataataacctatggaatggtgagcacc
aacatgtactactacaccaaagtcatgtctcaactctttttggatacgccactgtcaagt
ggagaaccaaccaacttcaagagcctttcaaccatggaggacttctggaaattcacagaa
ggcccgtttcttaacggcatgtactgggagctctggtacaacaacaagagtctcccagaa
aaccagagtctgatctattacgagaacctcctgctgggcgtcccgcgtctccgacagctc
agagtacgcaatgagtcttgttctgtccacgaggatctgcgagacgaggtttacgactgc
tacaacgtctactctcctgccaatgaggacaaggcaccattcggccccaagaatggcact
gcgtggaggttcaaggatgagagtagcctgggtgagagcagttactggggacaagtgtcc
acttatggtggtggaggttattaccaggatctgtcccgcacacgggagaaatcagccaat
cagctgcaggagctcaaaaacaacctctggctggaccgcggcactagagcggtgttcttg
gacttctccatctacaacggcaatgttaacctcttctgtattgtgagactgctagtagag
tttccagccacagggggcgctgtgccttcttggcagttccagacggtgcgtctgctccgc
tatgtctccagctgggactactttgttggcatgtgtgaagtgtccttctgcctcttcgtg
ctgtattacctggtggaggaagctctagagatccgcctgcatcggctgcgctacttcaag
agcctgtggaactgcttagatgttctcatagttgcattgagtgttcccgccatcattatg
aacatctgcagaacatcagcggtcagtcacagacttcactttctgctggagaaccacagc
acgtatcccaactttgagccgctggctcggcttcaggtgcacttcaacaacctggcagcc
atcatagtcttcctctcatgggtgaagctttttaagttcatcaacttcaacaagaccatg
aatcaactgtccaccaccatgtcccgctgtgccaaagacctgatgggcttcgcgatcatg
tttttcatcgtgtttctggcttatgctcagctggcctatttagtgtttggaactcaagtc
aacgacttcagcacctttcaggcctgcattttcacgcagttccggatcatactgggtgat
ttcgacttctcagaaatcgaggaggccgacagcgtgttgggacccatttacttcaccacc
tttgtgttcttcatcttcatgattctgctgaacatgttcctggccatcatcaatgacact
tactctgaggtgaaagctgacatggcgcagcagaggtcggagatggagatcacagacctc
attaagaagagctataatagagccatggtgaagctgaagctgaagaagagctctatcaat
gatatcccggacagcttacagcaggcagcaggaaaactcagcttcgatgagctccgccaa
gaccttagaggaaagggccattcggacgctgaaattgaagctatttttgccaagtatgac
cttgacggagatcaggagctgaccgaacatgagcaccagcagatgagagacgacctggag
aaagagagagaggacttggatctggagcacagttcgctgccgaggccagccagtggacgg
agcttctcccgtagccaagacgactccgaggaggatgatgacgaggacagtggacacagc
tctcgacgccgcggcagcagctccgggggcgtgtcttacgaggagttccaagtgcttgtg
cgccgggtggaccgaatggagcactcaattggcagcatcgtctccaagatcgatgccgtt
attgtgaagttggaagccatggagagagccaagatgaagaggagagatgtgcttggacgg
atcctggatggagtcatggaggacgagcggatgggtcgggatccagagctgcagcgagag
cagatggacaggttggttagggacgagctggagcgctgggagtctgacgacaccatgtcc
caggtgagccaccatcatcatcaggccactcccatcatctcatcagctcagctccgccca
cgcagctcccgcccaccctcctcgctgtccaacgagggcccggatgctgcagccagtggc
cccgcccacttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (87)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (110)   

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