KEGG   Danio rerio (zebrafish): 83415
Entry
83415             CDS       T01004                                 
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
  KO
K19472  homeobox protein SIX2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    83415 (six2a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    83415 (six2a)
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 YdaS_toxin Phage_mat-A
Other DBs
NCBI-GeneID: 83415
NCBI-ProteinID: NP_571858
ZFIN: ZDB-GENE-010412-1
Ensembl: ENSDARG00000058004
UniProt: Q98TH1
Position
13:10232695..10235566
AA seq 288 aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNPLTSSMNGNKTILGSSDDDKTPSGTPDHTSSSPALLLTSNS
GLQSLHGLAPPPGPSAIPVPSVDSVHHHHSLHDTILNPMSSNLVDLGS
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtctatgcttccaacattcggctttacgcaagagcaagtggcgtgcgtctgcgaggtt
cttcagcagggtggaaacattgaacgtctcggccgctttttgtggtctctaccggcttgc
gaacatctccacaagaacgagagtgtgctcaaagcgaaggctgtggtcgcatttcatagg
gggaatttcagagagctttataagattctcgaaagccaccagttctccccgcacaaccat
ccgaagttgcagcagctgtggctcaaagcgcattatatcgaggctgagaagctccggggc
cgccctcttggggctgttgggaagtaccgcgtccgaagaaagtttccgctaccccgctcc
atttgggacggcgaggagacaagttactgctttaaagaaaagagcaggagcgtgctgcgg
gaatggtatacccataacccctacccttccccgcgggagaaaagggaactagctgaggca
actgggctaacaacgacacaagtcagtaactggtttaaaaacagacgacaacgcgaccga
gcagcggaggcgaaggagagggagaataatgagaactcgaacacaaacagtcacaaccca
ttaacgtcctccatgaatggaaataagactattttaggaagctcggacgacgacaaaaca
ccgtctggtactcctgatcacacctcgtcgagcccggctttgctcctcacgtcgaactcc
gggcttcagtccctgcacggcctcgcacctccacctggtcccagcgccatcccagtgcct
agtgttgattccgtgcatcaccaccattcattacacgacactatactgaaccctatgtca
tcaaacttggtcgaccttggctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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