KEGG   Desmodus rotundus (common vampire bat): 112305229
Entry
112305229         CDS       T05907                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
dro  Desmodus rotundus (common vampire bat)
Pathway
dro03018  RNA degradation
dro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112305229 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112305229 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dro03019]
    112305229 (LSM4)
   03041 Spliceosome [BR:dro03041]
    112305229 (LSM4)
Messenger RNA biogenesis [BR:dro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112305229 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112305229 (LSM4)
Spliceosome [BR:dro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112305229 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 112305229
NCBI-ProteinID: XP_024416719
Position
Unknown
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQTGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgctcccattgtcactgctgaagacggctcagaatcaccccatgttggtagagcttaaa
aacggcgagacgtacaacgggcaccttgtaagctgtgacaactggatgaacatcaaccta
cgtgaggtgatctgcacgtccagggacggagacaagttctggcggatgccggagtgctat
atccgcggcagcaccatcaagtatctgcgcatcccggacgagatcattgacatggtcaag
gaagaggtggtggccaaaggtcgtggtcgcggtggcctgcagcagcagaagcagcagaaa
ggccgtggtatggggggtgccgggcgaggtgtgtttggcggccggggccgaggtgggatc
ccaggcaccggcagaggtcagccagaaaagaagccaggcaggcagacgggcaaacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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