KEGG   Desulforamulus ruminis: Desru_2460
Entry
Desru_2460        CDS       T01518                                 
Name
(GenBank) MutS2 family protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
dru  Desulforamulus ruminis
Pathway
dru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Desru_2460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dru03400]
    Desru_2460
DNA repair and recombination proteins [BR:dru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Desru_2460
SSDB
Motif
Pfam: MutS_V Smr MSSS AAA_22 Borrelia_P83 Gp-FAR-1 MutS_III
Other DBs
NCBI-ProteinID: AEG60693
UniProt: F6DNX4
Position
complement(2502966..2505317)
AA seq 783 aa
MQKTIKRLEFDKVLERLAAHAHSELGKERARELVPSVDRNTIIRWQSETHEGRELLRLDP
VAELGGWHDVRAAVVRAARFAVLSAEELLATGETLAAARRIKKFFTEKKDRYPLLSELAE
AMIHQPQLEKDILRAILPGGEIADDASPELLQIRRGLQRSQNRIRERMESIIRSSENQKY
LQDPIITIRNDRYVVPVKQEYRNQIPGIVHDQSASGATLFVEPMPVVEANNEVRRLVAAE
KQEIQKILAELSQGVSEISEELTITLDALGQLDFVMAKARYSRQLNAWGPKIVEGGVMDI
RKGRHPLLPADAVPATISLGKDFRSLVITGPNTGGKTVTLKTVGLFTLMTQSGLHIPAES
GTEMGVFSKIYADIGDEQSIEQSLSTFSSHMTNLVDILAGAGQGSLVLLDELGAGTDPTE
GAALARAILETLFQRGVCTIATTHYSELKNYAYTTPGVENASVEFDIETLRPTYRLLIGR
PGRSNAFEISARLGLSPEVVQRARQFLTTEQVEVADLINKLEQTQQAAEREREEAETLRR
DSEKLKERYRQLEQQLREKRESLLEKAQEEAARLVRNARLEADEAVKELRSKLAEENAKD
RESAIQQARNKLQRVTSKVAAKVPERVVPGEIPRQVKPGQQVFLPKYNQKAYVLSVSGDN
VQVQVGIMKMFVPLKELRRVAEEKVTSGQTQVGKVFMEKANSIGTSLDLRGMTGDEALLE
IEKYLDDALLAGLNSVILIHGKGTGALRAAVHRELKSHPRVKSFRLGEAGEGSSGATVVE
LKQ
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgcaaaagaccattaaacgtttagaatttgataaagtattggagcggctggcagcccac
gcccactcggaattaggcaaggaacgggcccgtgaactggttcccagcgttgaccggaat
accattatccgctggcagtccgagacccatgagggcagggaactgctaaggctggatccg
gtggcggagctggggggctggcatgatgtgcgggccgccgttgtccgggcggcgcggttt
gccgtactgtctgccgaggaactgctggccacgggggagaccctggccgccgcccggcgg
attaaaaagttttttaccgagaaaaaagaccgctatccactgctgtccgaactggcggag
gccatgattcatcagccccagttggaaaaagatatcctccgggccatcctgcccggaggt
gaaatcgccgacgacgcttccccggaactgctgcagatccgcaggggactgcagcggtcc
cagaaccgtatccgggagcgtatggagagcattattcgttccagtgaaaatcaaaaatac
ctgcaggaccccattattaccatccgcaacgaccgttacgtggtgccggttaaacaggaa
taccgcaaccagataccgggaatcgtccatgaccagtccgccagcggggctacactattt
gtggaacccatgccggtggtggaagccaataatgaagtacgacggctggtagcggcggaa
aagcaggagatccaaaaaatcctggcggaactttcccagggagtctcggagatctccgaa
gaattgaccatcaccctggatgccctggggcaactggattttgtgatggccaaagcccga
tacagccggcagttaaatgcctggggtcctaaaattgtagaaggcggagtaatggatatt
cgcaagggacgccatcccctgctgccggcagacgccgtgccggccaccatttccctggga
aaagactttcgtagccttgtgattaccggacccaataccgggggtaaaaccgtgaccctg
aaaaccgtgggactctttaccctgatgactcagtccggactgcacattcccgcggaatcc
ggaaccgaaatgggcgttttcagcaaaatctatgcggacatcggggacgagcaaagcatt
gaacaatccctcagcaccttttcctcccacatgaccaacctggtggatattttagccggg
gcgggacaggggtccctggtgctgctggacgaactgggggcgggaaccgaccccaccgag
ggcgcggccttggcccgggccattctggaaacgctgtttcaacggggagtctgcaccatt
gccaccacccactacagcgaactgaaaaattacgcttataccacaccgggagtggaaaac
gccagtgtggagttcgatattgaaaccctgcgtcccacctaccgcctgctgatcgggaga
ccgggccgcagcaacgcctttgaaatatccgccagactgggcctgagcccggaggtggtc
cagcgggcccggcagtttttaactaccgaacaagtggaagtggcggacctgatcaataaa
ctggagcagacccagcaggccgccgagcgggagcgggaagaagcggaaaccctgcgccgg
gacagtgaaaagctaaaggaacgataccgacagttggagcagcagttgcgggagaaacgg
gaaagccttttagaaaaagcccaggaggaagccgcccggctggtgcgcaacgcgcggctg
gaggccgatgaggcggtcaaggaactgcggtctaaactagccgaagaaaatgccaaggac
cgggagtcggccatccagcaggcccggaacaagctgcaaagggtgaccagcaaagtagcg
gccaaggtgccggaacgggtagtacccggggaaattccccggcaggtcaaacccggccag
caggtctttctgcccaaatacaaccagaaggcctatgtgctctcggtttccggcgacaac
gttcaggtccaggtggggattatgaaaatgtttgtgcccctcaaggaactacgccgggta
gctgaagaaaaagtaacctccggccagacccaggtgggcaaagtatttatggagaaagcc
aactccattggaaccagcctggatttacgaggcatgaccggggatgaggctctgctggaa
attgaaaaatacctggacgacgctcttttggcgggtctcaacagcgtcattctaattcac
ggcaaaggcaccggggcactgcgggcggcagttcaccgggaattaaaaagccatcccaga
gtaaagtccttccgcctgggcgaagccggcgaaggcagctccggagccaccgtggtggaa
ctgaagcagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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