KEGG   Dinoroseobacter shibae: Dshi_2882
Entry
Dshi_2882         CDS       T00612                                 
Symbol
sucD1
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh00020  Citrate cycle (TCA cycle)
dsh00640  Propanoate metabolism
dsh00660  C5-Branched dibasic acid metabolism
dsh01100  Metabolic pathways
dsh01110  Biosynthesis of secondary metabolites
dsh01120  Microbial metabolism in diverse environments
dsh01200  Carbon metabolism
Module
dsh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dsh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Dshi_2882 (sucD1)
   00640 Propanoate metabolism
    Dshi_2882 (sucD1)
   00660 C5-Branched dibasic acid metabolism
    Dshi_2882 (sucD1)
Enzymes [BR:dsh01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Dshi_2882 (sucD1)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-ProteinID: ABV94615
RoseoBase: Dshi_2882
UniProt: A8LJL2
Position
3035436..3036317
AA seq 293 aa
MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLNLPVFNSVHEA
KAVTEANATVIYVPPPFAADSILEAIDAEMEVIVCITEGIPVLDMMKVKRALEGSASRLI
GPNCPGVITPDACKIGIMPGHIHKRGTVGVVSRSGTLTYEAVKQTTDVGLGQSTCVGIGG
DPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLADEKKRGRWKPTAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIEAMQSAGIVVAESPAGLGEAVLKAIG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggccgtacttatcgacgaaaacaccaaggttatctgccaaggcttcaccggcagccaa
ggcaccttccattccgagcaggcgatcgcctacggcaccaagatggtcggcggggtgacc
ccgggcaagggcggccagacccacctgaacctgccggtgttcaactcggtccacgaggcc
aaggccgtgaccgaggcgaatgccaccgtgatctatgtcccgccgcccttcgccgccgac
tcgatcctggaggcgatcgatgccgaaatggaagtgatcgtctgcatcaccgaaggtatc
ccggtgctggacatgatgaaggtcaagcgcgcgctcgaaggctccgccagccgcctgatc
gggccgaactgccccggtgtgatcacgccggatgcctgcaagatcggcatcatgcccggc
catatccacaagcgcggcaccgtgggcgtggtctcgcgctccggcacgttgacttacgag
gcggtgaaacagaccaccgacgtggggctgggccagtccacctgcgtcggcatcgggggc
gacccgatcaaggggaccgagcatatcgacgtgctggaatggttccttgccgatgacgag
accgagagcatcatcatgatcggcgagatcggtggctccgccgaggaagaggccgcgcaa
ttcctcgccgacgagaagaagcgcggccgctggaagcccaccgcgggcttcatcgcgggc
cgcacggccccgccgggtcgccgcatgggccatgcaggcgcaatcgtcgccggcggcaag
ggcggcgccgaggacaagatcgaagccatgcagagcgcgggcatcgtggtggcagagagc
ccggcgggcctaggcgaagccgtgctcaaggcgatcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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