KEGG   Dinoroseobacter shibae: Dshi_3724
Entry
Dshi_3724         CDS       T00612                                 
Name
(GenBank) extracellular ligand-binding receptor
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02010  ABC transporters
dsh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Dshi_3724
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dshi_3724
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dsh02000]
    Dshi_3724
Transporters [BR:dsh02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    Dshi_3724
SSDB
Motif
Pfam: Peripla_BP_6 Peripla_BP_5 ANF_receptor
Other DBs
NCBI-ProteinID: ABV95455
RoseoBase: Dshi_3724
UniProt: A8LT88
Position
pDSHI01:131326..132480
AA seq 384 aa
MQTAAVAALVAGSATAQDGPIRVGVVTPISGTYAGIGQQVSWGLDLAAEEINASGGIMGR
QIELIYEDSEANPAVAVQKAEKLMTAEDVDFLTGTVNSGATLAVGQVAERAGKLLATTVS
FSDAITGEKCSPNVFRVNARAGQQSAALAAWVESEKPGAKVFYLGPDYEMGRSTVAAFKS
NAEQVGAKSTGEVFAPLDSKDYSQYFGRIRAAQPEVLYTSVAGNDTVRLFTQMQDFGVRD
GLTILGASGTVTSQNIDAIGAAAEGFITGVGYSTLIDSPENKAFVEAFNARNGADPDLYG
ADSYGLLFAYKKAVEAAGGTGTDEVRAALEGLEWDTPQGVKTIRAGDHQAIQPMYAVQIK
DSAFTIANTIDGDAAIGPDTCERF
NT seq 1155 nt   +upstreamnt  +downstreamnt
ttgcagacagccgcagtcgcggcacttgtcgcggggtcggccacggcccaggacgggccg
atccgcgtcggcgtggtgacgccgatttcgggcacctatgccgggatcggccagcaggtc
agctgggggctcgacctcgcggcggaggagatcaacgcgtcgggtggcatcatgggccgc
cagattgagctgatctacgaggacagcgaggcgaacccggcggtcgccgtgcagaaagct
gaaaagctgatgaccgccgaggatgtcgatttcctgaccggcaccgtcaattccggtgcc
accctcgcggtcggccaggtggccgagcgggcgggcaagctgctggcaacgacggtctcc
ttctctgacgccatcaccggcgagaaatgttcgcccaacgtgttccgcgtgaacgcgcgg
gcaggccagcaatcggcggccctcgccgcctgggtcgaaagcgagaaaccgggtgccaag
gtgttctacctcggcccggactacgagatgggccgctcgaccgtcgccgcattcaaaagc
aacgcggaacaggtcggtgccaaatcgactggcgaagtttttgcgccactcgattccaag
gactacagccagtatttcggtcgaatccgtgccgcccagcctgaagtcctctatacttcg
gtcgcgggcaacgacaccgtgcgcctgttcacccagatgcaggatttcggtgtgcgtgac
gggctgaccatcctcggcgcgtccggcaccgtgaccagccagaacatcgacgccatcggc
gccgccgccgaagggttcatcaccggggtcggctattcgaccctgatcgacagcccggaa
aacaaggcgttcgtcgaggcattcaatgcccgcaacggggccgatccggacctttacggt
gccgacagctatggcctgctttttgcctacaagaaggcggtcgaagcggcgggcggcacc
ggcacggacgaggtgcgcgcagcactcgaagggcttgaatgggacacgccccagggcgtc
aagacgatccgcgcgggtgaccaccaggcgatccagccgatgtacgcggtgcagatcaag
gacagcgcgttcaccatcgccaataccatcgacggcgacgccgccatcggcccggacaca
tgtgaacgcttctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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