KEGG   Dichomitus squalens: DICSQDRAFT_99797
Entry
DICSQDRAFT_99797  CDS       T03133                                 
Name
(RefSeq) DNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
dsq  Dichomitus squalens
Pathway
dsq03022  Basal transcription factors
dsq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DICSQDRAFT_99797
  09124 Replication and repair
   03420 Nucleotide excision repair
    DICSQDRAFT_99797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_99797
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_99797
Enzymes [BR:dsq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DICSQDRAFT_99797
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DICSQDRAFT_99797
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DICSQDRAFT_99797
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_34
Other DBs
NCBI-GeneID: 18845480
NCBI-ProteinID: XP_007362379
JGI: 99797
Position
Unknown
AA seq 862 aa
MSSKRAAEGFADVSQPAKRSKKGQDNDEYVDVDNLEAVEMESPPETSLVPRGATINFTAL
TRKLADARREREIAEGKDESTLSIHRRQQDALVSHIFQDHDFAWLHLKPDHASRPLWISP
EDGHIILEAFSPIAEQAQDFLVAIAEPVSRPAFIHEYKLTSYSLYAAVSVGLQTEDIIEV
LNRLSKVPVPESLDSFIRERTLSYGKVKLVLKHNKYFVESSHPETLQFLLKDRVIREARV
HSAPVDNSIRAATFTTSKAPVKGNLVIPGTKEAEKKKEELANGKGAGGKTDAELFTSVVG
VEHDEVEEDDDNVHAFEIDDAKIDEVKKRCNDLEYPMLEEYDFRNDTVNANLEIDLKPST
VIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLCTSSVSVMQW
RQQFMQWSNITDKQIAVFTADQKEKFAGDSGIVVSTYSMVANTGNRSHESKKMMEFLTSR
EWGFILLDEVHVVPAVMFRRVVSTIKAHSKLGLTATLVREDDKIADLNYMIGPKLYEANW
MELAAKGHIANVQCAEVWCPMTPEFYREYLREQSRKRMLLYCMNPRKFQACQFLIKYHED
RGDKIIVFSDNVFALEAYAKKLGKLYIHGGTGQTERMRILQHFQHSPEVNTIFLSKVGDT
SIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYST
KRQQFLIDQGYAFKVITHLDGLDDLPGLVYKSRDEQIELLSSVLLANESEAELGTDVVAS
EGDLKGTVTSKDFGTPSKAPTVQRTTGSLTALSGAQHMSYVEQNKSANRKLAREVAPRHK
LFAKRDKDVAAARKEARTASKG
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgtcgagtaagcgagcagcagaaggctttgcagacgtgtcgcaacctgcaaagaggtcc
aagaagggtcaggataacgacgagtatgtcgatgttgacaaccttgaagccgtcgagatg
gagtctcctcctgaaacatcacttgttccccgtggcgccaccatcaacttcactgccctc
actcgcaagttggcggatgcaagacgtgagagggagattgcggagggaaaggacgagtcg
actttgagtatccatagaagacagcaggatgcccttgtctcgcatattttccaggaccat
gacttcgcttggctgcatctcaagcctgaccacgcttcgcgcccgctctggatcagcccc
gaagatggtcacatcatcctagaggcgttttcccccattgcggagcaagcacaagatttc
cttgtcgccattgctgagccggtcagcagacccgcgttcatccacgaatacaagctcact
tcctactcgctatacgccgctgtttctgtgggattacagacggaggacatcatagaagtg
ctgaatcgtctttccaaggtacccgtgcccgagagtctcgacagtttcatccgggaaagg
accctgtcgtatggcaaggtcaagcttgtcctgaagcataacaagtacttcgtcgagtca
agtcacccggagacgctgcagtttttgctaaaagatagggttatacgggaggcccgcgtc
cactctgcacccgtggacaacagcatccgtgctgcgaccttcaccacctcaaaagcccct
gttaaaggcaacctcgtgattcccggcactaaggaggcagagaagaagaaagaagagctg
gcgaatggcaagggggctggtgggaaaaccgacgcagagcttttcacttctgttgtcggt
gttgaacatgatgaggtggaagaggatgatgataacgttcacgcctttgagattgatgat
gcaaagatagacgaggtcaagaagcgatgcaatgacctggaataccctatgctagaagag
tacgacttccgcaacgataccgtcaatgccaacctagagatcgatctcaagccatctact
gtcattcgtccgtaccaggagactagtctcagtaagatgtttggaaacggacgcgcgcgg
tctggcatcatcgttctcccttgtggtgccggcaagacgctagtcggaattaccgcggct
tgcacgatcaagaaatcgtgcctcgtcctttgtacatcatcggtttcagtcatgcagtgg
cgccaacaattcatgcagtggtcaaatatcaccgacaagcaaattgccgtcttcacagcc
gatcagaaggagaagttcgctggggacagtggcatcgttgtctctacttactccatggtg
gctaacaccggcaaccgttctcatgagtcgaaaaagatgatggagttcctcacgtcgcgc
gagtggggtttcatcctcctcgatgaggtgcatgtcgtacccgccgtcatgttccgacgg
gtggtttcgaccattaaggcgcactccaagttggggctgacagcaacactggttcgtgag
gacgataagattgccgaccttaactacatgattggtccgaagctgtatgaggcaaattgg
atggagctggcagcgaaggggcatattgccaatgttcagtgtgcggaggtttggtgccct
atgacccccgaattctaccgtgaatacctgcgggaacagtcgcgcaaacgcatgcttctg
tattgcatgaaccctaggaagtttcaggcgtgccagttcctcatcaagtaccatgaggac
agaggggacaaaatcattgtcttttcggataacgtgtttgctctcgaggcgtacgcgaaa
aagctcgggaagctctatattcatgggggtacggggcagaccgagcggatgcgaatcctt
caacacttccagcacagtcctgaagtgaacacgattttcctatcaaaggtcggcgacacc
tcgatcgacttacccgaggcgacctgtctcatacaaatctcctcgcacttcggctcccgt
aggcaggaagcgcagcggcttgggcgcattttgcgtgcgaagaggcgtaacgacgagggg
ttcaacgccttcttctattctcttgtctccaaggacacccaggagatgttctacagcacc
aagcggcaacaattcctgatcgaccaaggttacgccttcaaggtcatcactcatctcgac
ggccttgacgacctgccggggctcgtctacaagtcgcgcgacgagcagattgaattgctg
tcctcggtacttctcgccaacgagagcgaagctgaactcggaacagacgttgtcgccagt
gagggagacctcaagggcaccgtcacatccaaggacttcgggacgccgtcgaaggctcct
accgtgcagcgtaccacaggctcactcaccgcgctcagcggggcccaacacatgtcgtac
gtggagcagaacaagtcagccaacagaaagctcgcgcgtgaagttgctccccgccacaag
ttgttcgctaagcgtgacaaggatgtggctgctgcgcggaaggaggctaggaccgcctcc
aagggttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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