KEGG   Dickeya zeae: W909_03100
Entry
W909_03100        CDS       T03567                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dzc  Dickeya zeae
Brite
KEGG Orthology (KO) [BR:dzc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dzc03016]
    W909_03100 (truB)
Enzymes [BR:dzc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     W909_03100 (truB)
Transfer RNA biogenesis [BR:dzc03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    W909_03100 (truB)
 Prokaryotic type
    W909_03100 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AJC65145
Position
656251..657207
AA seq 318 aa
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERPVTFTHDALMLALDSFRGDTQ
QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEADELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVMYLRRLQVATYPTERMVTLEQLQTLREQAEAQEQPIGDLLDVL
LLPMDTAVQAFPEVNLSPVVAGYLKLGQAVRATAVPTDGMVRITEGDEHRFIGMGEIDDE
GRVAPRRLVVENPEPTGV
NT seq 957 nt   +upstreamnt  +downstreamnt
atgtcgcgtcctcgccgtcgtggtcgtgatatccacggcgttctactgctggataaacca
caaggggcgtcatctaacgatgtcctgcagaaggtaaagcgcctcttcaatgccaacaaa
gccgggcatacgggcgcactggatccattggcgaccggtatgctgccgatatgtctgggt
gaagcgaccaagttttcccaatacctgctggatgccgataagcgttaccgggtgatagcc
cgtctggggcaacggaccgatacgtctgatgccgacggtaatgttatccaggaacgtccc
gtcacatttacgcatgacgcgttaatgctggcgctggacagctttcgcggcgatacccag
caggtaccgtcgatgtattctgctctgaaataccagggccgcccgctctacgagtacgcc
cgtcaagggctggttgtgccgcgggaagcgcgtgacatcaccgtctatgagttgcagttt
atccgctgggaagccgacgaactggagctggaaatccactgctccaagggaacgtacatc
cgtaccatcattgatgatctgggtgagaagctggggtgtggcgctcatgtgatgtatctg
cgccgtttgcaggtggcgacgtatcctaccgagcgtatggtcacgctggagcagttacag
acgctgcgtgaacaggcagaagcacaagaacaaccaattggtgacttgctggatgtactg
ctgttaccaatggataccgctgtgcaggcgtttccagaggtgaatctgtcaccagtggtg
gcgggttaccttaaacttggccaggccgtgcgtgctaccgctgtaccgaccgatggcatg
gtgcgaatcactgagggtgacgaacaccgattcatcggtatgggtgaaatcgatgatgaa
ggacgggtggcaccgcgccgtctggtagtcgaaaaccctgagccgacgggtgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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