KEGG   Durio zibethinus (durian): 111291421
Entry
111291421         CDS       T05242                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X1
  KO
K10899  ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
Organism
dzi  Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dzi03400]
    111291421
Enzymes [BR:dzi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     111291421
DNA repair and recombination proteins [BR:dzi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     111291421
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind HRDC ResIII RQC GPS2_interact
Other DBs
NCBI-GeneID: 111291421
NCBI-ProteinID: XP_022738880
UniProt: A0A6P5YEV7
Position
Unknown
AA seq 740 aa
MEAEEIAAELQKVEAEIHDVEDQIRDLFERQEKLYERQSELKALLETRPVAVKDVSSSTT
VQVEDWSGPFDWDSQADDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGKSLCY
QLPAILRQGIALVVSPLLSLIQDQVMGLVASGIPAFMLTSTTNKEDEKFIYKALEKGEED
VKLLYVTPEKISKSKRFMSKLEKCNHAARLSLISIDEAHCCSQWGHDFRPDYKNLGILKT
QFPNVPVVALTATATMKVQNDLIEMLHIPKCIKFVSTVNRPNLFYMVQEKSSVGKVVIDE
IAEYIKESYPNKESGIVYCFSRKECVQVASELCERGISADYYHADMDVNAREKVHMRWSK
NKLQVIVGTVAFGMGINKPDVRFIIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRPAD
VPRQSSMVFHENSGLQNLYDIVRYCQSKRQCRRSAFFQHFAEPLQECNGMCDNCAFSSEV
KEVNASGHTKLMISLVHDMQEKDQRVTMLQLVDRVKNKQKQLDTTGAKLFVCVFVCGGRN
LQSDLELKREEMEQLVVQLILDRVLNFVMMCLLAVKKEEFQHTAYATNAYVTVGPSANQI
LQGKKIIKMDVACRTKELDGYRKSIKHGVTSVLEFKLDELRKKLACHDGGIFPHSILSGQ
HISIISALKPSSIEELEKIIGKLKTEKYGDRIIEEVKKYGIAEDPNCDVLNGEPGTEIIP
RKKLKTKKEVVLIESSNDES
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggaagcagaggagatagcggcggagctgcaaaaagttgaggctgagattcatgacgtt
gaagaccagataagggatttatttgagaggcaagagaagttgtacgagaggcaatcggaa
ctgaaagctttgctggaaacacgtcctgtagctgtaaaagatgtctcctcttcaaccact
gtgcaagtggaagactggtcaggaccatttgactgggattctcaagccgacgatattagg
tttaacgttttcggcatctcttcatatcgtccaaatcagcgagaaatcataaatgcagta
atgagtggaagagatgttctggtgattatggctgcaggtggtggcaagagcctttgctac
cagcttcctgccatccttcgtcaaggaattgctcttgttgtcagtcctttgctttcttta
attcaagatcaggtaatgggtttggtcgcctcaggcattccagcattcatgctcacatcc
acaacaaataaggaagatgagaagttcatatacaaggccttggagaaaggcgaagaagat
gtcaaattattgtatgtcacacctgagaaaatatccaaaagcaagagatttatgtccaag
cttgaaaaatgcaaccatgctgctcgcctttctcttatttcaattgatgaggctcattgc
tgtagtcaatggggtcatgattttcgccctgactataaaaatcttggtatactcaaaact
cagtttccaaatgtacctgtagtagctttgacagcaactgctacaatgaaagtccagaat
gatctgattgagatgttgcatattccaaaatgcataaagtttgtcagcactgtcaaccgg
ccaaatctgttttatatggttcaagaaaagtcatctgttggaaaggtggttattgatgaa
atagctgaatatataaaggaatcttatccaaataaggaatctggcatagtttattgcttt
tccagaaaggaatgtgtgcaggttgcaagtgagttatgtgagagaggaatatcagctgat
tattaccatgcagacatggatgtaaatgctcgtgagaaagttcacatgcgatggagcaaa
aataagttgcaggtcattgttggtacagttgcatttggtatgggaatcaacaaacctgat
gtcaggttcatcatccatcatagcctgagtaaatcaatggaaacatattaccaggaaagt
ggccgagctggaagagatggactcccctctgagtgtttgctcttttttaggccggctgat
gttcctcggcagagttccatggtcttccacgagaactctggattgcagaacctttatgat
atagtacgatattgtcagtctaaaagacaatgtcgccgaagtgcctttttccagcatttt
gctgagccattacaagagtgcaatgggatgtgtgacaactgtgcattctcaagtgaggtt
aaagaagtgaatgcttcaggtcatacaaaacttatgatttctctggtgcatgatatgcaa
gagaaagatcaaagagtgacaatgttgcaactggtggacagagtgaaaaataagcaaaag
caactagacacaacaggagcaaaactatttgtgtgtgtgtttgtgtgtggagggcgcaac
cttcaatcagatttggaactaaagagggaagagatggaacagcttgtagtacaacttata
ctagatcgtgttttgaatttcgtaatgatgtgtttgttggcagtcaagaaggaagaattt
cagcatacagcttatgctacaaatgcttatgttacagtaggaccatcagcaaaccaaatt
ttgcaagggaaaaaaatcatcaagatggacgttgcttgcagaacgaaggaattggatggt
tacaggaaatcaattaaacatggtgtcacatcggttttggagttcaagctagatgagcta
aggaagaaacttgcatgtcatgatgggggaatattccctcattctatcttgtcaggtcaa
catatcagcataataagcgcccttaaaccaagttcaattgaagagctagagaagataatt
ggaaagttaaagacagaaaagtacggggatagaattattgaagaagtcaaaaagtatggt
attgccgaggatccgaattgtgatgtgttgaatggagaaccaggcactgaaataatacct
agaaagaagctgaagaccaaaaaggaagttgttctcattgagagcagtaatgatgaatca
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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