KEGG   Escherichia coli APEC O78 (APEC): APECO78_16525
Entry
APECO78_16525     CDS       T02445                                 
Name
(GenBank) tRNA-specific adenosine deaminase
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
ecoa  Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:ecoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecoa03016]
    APECO78_16525
Enzymes [BR:ecoa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     APECO78_16525
Transfer RNA biogenesis [BR:ecoa03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    APECO78_16525
SSDB
Motif
Pfam: MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 APOBEC_N NAD1 NAD2 APOBEC2
Other DBs
NCBI-ProteinID: AGC88026
Position
complement(3441873..3442409)
AA seq 178 aa
MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPI
GRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDA
KTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcgccgcgcttttataaccggagttttctttttgtctgaagtcgaatttagccacgaa
tactggatgcgtcacgcgctgacgctggcgaaacgtgcctgggatgagcgggaagtgccg
gtcggcgcggtattagtgcataacaatcgggtaatcggcgaaggctggaaccgcccgatt
ggtcgccatgatcccaccgcacatgcagaaatcatggccctgcggcagggtggtctggtg
atgcaaaattatcgtctgatcgacgccacgttgtatgtcacgcttgaaccatgtgtaatg
tgtgccggagcgatgatccacagtcgcattggtcgcgtggtctttggtgcgcgtgacgcg
aaaactggcgctgcgggatctttaatggatgtgctgcatcatccgggtatgaatcaccga
gtggaaattacggaaggaatactggcggatgagtgcgcggcgttgctcagtgacttcttt
cgcatgcgccgccaggaaattaaagcgcagaaaaaagcgcaatcctcgacggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system