KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3242
Entry
ECRM13516_3242    CDS       T03011                                 
Symbol
yfhC
Name
(GenBank) tRNA-specific adenosine-34 deaminase
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecoh03016]
    ECRM13516_3242 (yfhC)
Enzymes [BR:ecoh01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     ECRM13516_3242 (yfhC)
Transfer RNA biogenesis [BR:ecoh03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    ECRM13516_3242 (yfhC)
SSDB
Motif
Pfam: MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 APOBEC_N NAD1 NAD2 APOBEC2
Other DBs
NCBI-ProteinID: AHG15888
Position
complement(3221388..3221924)
AA seq 178 aa
MRRAFITGVFFLSEVEFSHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPI
GRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDA
KTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcgccgcgcttttataaccggagttttctttttgtctgaagtcgaatttagccacgaa
tactggatgcgtcatgcaatgacgctggcgaagcgtgcctgggatgagcgggaagtaccg
gtcggcgcggtattagtgcataacaatcgtgttattggcgaaggctggaaccgtccgatt
ggtcgacatgatcccaccgcacatgcagaaatcatggccctgaggcagggcggtctggtg
atgcaaaattatcgtctgatcgacgccacgttgtatgtcacgcttgaaccatgtgtaatg
tgtgccggagcgatgatccacagtcgcattggtcgcgtggtctttggcgcgcgtgacgcg
aaaactggcgctgcgggatctttaatggatgtgctgcatcatccgggtatgaatcaccga
gtggaaattacggaaggaatactggcggatgagtgcgcggcgttgctcagtgacttcttt
cgcatgcgccgccaggaaattaaagcgcagaaaaaagcgcaatcctcgacggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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