KEGG   Elaeis guineensis (African oil palm): 105041126
Entry
105041126         CDS       T03921                                 
Name
(RefSeq) vam6/Vps39-like protein isoform X1
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:egu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    105041126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egu04131]
    105041126
Membrane trafficking [BR:egu04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    105041126
SSDB
Motif
Pfam: Vps39_2 Vps39_1 CNH Clathrin PPR LIN52 zf-HC5HC2H DUF2175 AlaDh_PNT_N
Other DBs
NCBI-GeneID: 105041126
NCBI-ProteinID: XP_010916252
UniProt: A0A6I9R145
Position
3:complement(18975521..18990052)
AA seq 997 aa
MVHSAYDSVELLKGCPARIEAVASYGSKILLGCSDGSLRIYAPSSALAAGDDGPLSPNPG
IRREPYILERTVTGFWKRALVAMEASRSRDLLLSLSEWIALHRLPNLETVVAIGKTKGAN
VFSWDDRRGFLCVGRQKRIGIYRLDGGREFVEVKEFGVPDVVKSMAWCGENICLGIRREY
MIMNCTTGALSEVFPSGRIAPPLVVPLPSGELLLGKDNIGVFVDQNGKLLQDGRICWSEA
PASVAIHKPYAVGRLPRHVEIRSLRAPYPLVQTVVLRDVHLLLQSNNCVIATLSNSVYGL
LPVPLGAQIVQLTASGDFEEALALCKLLPPEDSTLRAAKESSIHMRYGHYLFDNGSYEES
MEQFLASQVDINYVLSLYPSIVLPKVLTIAEPEKFPDLNDESLLSRVSSDASDEIESSSP
SQLQESDDKSMLEIKKMSHNALMALVKYLHKRRYSIIERATAEVTEEVVSDAVQDSITSE
PYRSKSSSKKRRPTHISSVAREMATMLDTALLQALLLTGQSSGALELVKGPNYCDLKICE
EFLKERNQYTALLELYKSNEMHREALRLLNQLVEESKSSFPNSELTQKFRPDMIIDYLKP
LCRSDPMLVLEFSMHVLESCPTETIELFLSGNIPADLINSYLKQHAPNMQSTYLELMLSM
SENGINTDLQNELVQIYLSEVLDWYKDLKEQENWDEKTYSSTRRKLLTALESISGYNAEA
LLKRLPSDGLYEERAVLLGKMNQHQLALSLYVHKLHLPALALAYCDWVYETGSRHPSRSY
ANIYLTLLQIYLNPQRTVKESDQRTTNPVPSQNIGTQRIGSAKVKSRMAKKIAEIEVADD
TRISPSSTDSGRSDGDGDEVTEGGGPIMLNDALDLLSQRWDRINGAQALRLLPRETKLQS
LLPFLEPLLKKSSEGRRNYSVVKSLRYSENLQVKQDLYKYRQTAVKIDGDSTCSLCRKRI
GSSVFAVYPNGKTLVHFVCFRDSQNMKAVRGAPRKQL
NT seq 2994 nt   +upstreamnt  +downstreamnt
atggtgcacagcgcctacgactcggtagagctcctcaagggctgtcccgcaaggatcgag
gccgtcgcctcctacggctcgaagatcctccttggatgctccgacggctccctccggatc
tatgccccctcctccgccctcgccgccggcgacgatggacccctttcccccaaccctggg
attcggcgagagccctacatcctggagcggacggtcacagggttctggaagcgcgccctg
gtcgccatggaggcttcccggtcccgagatctcctgctttccctctccgaatggatcgcc
ctccaccgccttcccaatctcgagacggtcgttgctatcggaaagacgaagggtgccaac
gtcttcagctgggatgaccgaagggggttcctttgcgttggtaggcagaagaggatcgga
atttaccgccttgatggtggtcgagaatttgtggaagtgaaggagtttggtgttcctgat
gtggtaaagtctatggcttggtgtggggaaaacatatgtttggggattagaagggaatac
atgataatgaactgtacaactggtgcactctcagaggttttcccttctgggaggattgca
cctccattggtggtccctcttccttcaggggagcttcttctaggaaaggataatattgga
gtttttgttgaccaaaatgggaagcttctacaagatggcaggatatgttggtctgaagcc
cctgcatctgttgcaatccacaagccatatgcagtaggccgcctaccaaggcatgttgag
atacggtccctgagagctccttatccattggttcagactgttgttctccgcgatgttcat
ctccttctccaaagcaacaattgtgtgattgctacactaagcaattctgtttatggcctg
ttgcctgtcccacttggtgcacagattgtacagttaactgcatctggagattttgaggag
gccttggctttgtgtaagcttctacctcctgaggattcaacccttcgagctgcaaaagaa
agctcaatacacatgagatacgggcattatttatttgataatgggagctatgaagaatca
atggagcagtttttagcttcacaagtggatattaactatgtgctgtctttatacccatct
atagttcttcctaaggtgctgactatagctgagcctgagaagtttccagatttgaatgat
gaatcacttctctcaagggtttcatctgatgcctcagatgaaatagaatcatcatcacca
tcacaactccaggaatctgatgataaatcaatgcttgagatcaagaaaatgagtcacaat
gctcttatggcccttgtaaagtacttgcataagagaagatacagtatcattgaaagggct
actgctgaggtaacagaggaggttgtctcagatgctgtgcaggacagtataacatctgag
ccatatcggtcaaagagctcaagcaagaaacgtcgtcccacacatatcagttctgttgcc
agagagatggcgactatgcttgacactgcacttcttcaggctctgcttctcactggacag
tcgtcaggggcattagagttagtgaagggtcccaactattgtgatttaaagatatgcgaa
gagtttctaaaggaaaggaatcaatatacagcactgttggaactttacaagagcaatgag
atgcaccgtgaagctctcagacttctcaatcaactagttgaggaatcaaaatccagcttt
ccaaattcagagctcactcagaagttcaggccagatatgattattgattatctgaagcca
ctctgtaggagcgatccaatgcttgttttagaattctctatgcatgtccttgaaagctgc
ccaacagaaactattgagctctttctgtctggaaatattccagcagacttgataaattca
tacttgaaacagcatgctccaaacatgcagtctacatatttagagcttatgctctcgatg
agtgaaaatggaatcaacacagatttgcaaaacgaactggtgcaaatctacctttcggaa
gtactagattggtacaaggatctgaaggaacaagagaattgggatgagaaaacttactcc
tcgactcgtaggaagttgttgactgctttggaaagtatttcaggttataatgcggaggct
ctgttaaagcgtcttccatcagatggtctctatgaggaacgtgcagtattgcttgggaaa
atgaatcaacatcagcttgccttgtctctctatgttcataagcttcatttacctgcacta
gcacttgcgtattgtgattgggtttatgagacaggatcacgtcatccgtcaagatcatat
gctaatatttatcttactcttctacaaatttatcttaacccgcaaaggacagtaaaggaa
tctgaccaaagaactacaaatccagtaccttcccagaatattgggactcaaaggattggt
tctgctaaggtcaagagtcgcatggctaaaaaaattgctgagattgaggtggcagatgat
actcgcatcagccccagcagcactgacagtggacgaagtgatggtgatggagatgaagtg
acagaaggaggaggtccaataatgttgaatgatgcacttgatttgttgagccagagatgg
gatagaatcaatggtgctcaggcacttagactattaccaagagagacaaagctccagagc
ttgcttccatttctggaaccccttctgaagaaatctagtgaaggtcgcagaaattattca
gtggtgaagagcttgagatacagcgaaaatttgcaggtaaaacaggatctttataagtat
cggcaaactgctgtgaaaattgatggtgatagcacatgttccctttgccgtaaacggata
gggagtagcgtatttgcagtttatccaaatggcaagacactcgttcattttgtttgcttt
agagactctcagaatatgaaggctgtgagaggtgcacctagaaagcaattgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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