KEGG   Elaeis guineensis (African oil palm): 105047027
Entry
105047027         CDS       T03921                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105047027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105047027
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105047027
 Complex C
   U5 SnRNP specific factors
    105047027
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 eIF2A Nup160 Cytochrom_D1 DUF5074
Other DBs
NCBI-GeneID: 105047027
NCBI-ProteinID: XP_010924106
UniProt: A0A6I9RBX4
Position
6:complement(28476937..28481660)
AA seq 343 aa
MLAAPSNNVLAVAGSRPGNQLATIPQSFQTPGPGGKQRTSSLESPIMLLTGHQSAIYTMK
FNPAGTVISSGSHDKDIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQLISASPDKTL
RAWDAETGKQVKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRMRGAIQTFPDK
YQITAVGFSDTADKIFTGGLDNDVKVWDLRRNEVIMTLQGHGDMITGMQLSPDGSYLLTN
GMDCTLRIWDMRPYAPQNRCVKIFTGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYIWD
TTSRRILYKLPGHNGSVNETVFHPTEPIIGSCGSDKQIYLGEL
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcttgctgcacctagcaacaatgtgttggctgttgcaggatcaagaccaggaaatcaa
ttggctaccattcctcaatcctttcaaactccaggtccaggtggaaagcagcggacctcc
agtcttgagtcacctataatgctgctcacaggtcaccagagtgctatatacaccatgaag
ttcaacccagcaggaactgtgataagttctgggtcccatgacaaggatatcttcttgtgg
tatgtccatggggattgcaaaaatttcatggtcttgaaaggacacaagaatgcaattctg
gacctccagtggaccactgatggaacccagttaatctcagcaagccctgacaagactctt
agagcatgggatgctgagaccgggaagcaagttaagaaaatggcagagcactcatctttt
gtgaactcgtgctgcccttcacgcaggggtccacctcttgttgtgagtggctccgatgat
ggaacagccaaactctgggatcttcgtatgaggggtgcgatccagacatttccagacaag
tatcagatcaccgccgtcggtttctcagatacagcagacaagatctttaccggtggatta
gacaatgatgtgaaggtgtgggatcttcgcagaaacgaggtgataatgactctccagggc
catggggacatgataacaggcatgcagctgagtcccgacgggtcttatctcttgactaac
ggcatggattgcacactacgtatctgggatatgcgcccctatgctccacagaaccgatgc
gtgaaaatttttacggggcaccagcacaactttgagaagaaccttttgaaatgtagctgg
tcacctgatgggagcaaggtcactgcaggtagtgcagaccggatggtatatatctgggat
acgacatcacgtcgcatcttgtataagcttcctgggcacaatggatctgtcaatgagact
gtgtttcaccctaccgagcccattattggatcttgcggcagtgacaagcagatctatctt
ggagaactttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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