KEGG   Elaeis guineensis (African oil palm): 105050617
Entry
105050617         CDS       T03921                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03013  Nucleocytoplasmic transport
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105050617
  09122 Translation
   03013 Nucleocytoplasmic transport
    105050617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105050617
   03041 Spliceosome [BR:egu03041]
    105050617
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105050617
Spliceosome [BR:egu03041]
 Complex C
  Other components
   EJC/TREX
    105050617
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105050617
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 PROPPIN CNH
Other DBs
NCBI-GeneID: 105050617
NCBI-ProteinID: XP_010929004
UniProt: A0A6I9RM15
Position
8:complement(34490668..34503366)
AA seq 318 aa
MEDKSLSFKNLSSREYQGHKKKVHSVAWNCLGTKLASGSVDHTARVWNIDPHGHGKVKDI
ELKGHTDSVDQLCWDPKHPDLVATAAGDKTVRLWDARSGKCSQHAELSGENINITYKPDG
THIAVGNKEDELTILDVRKFKPIHRRKFNYEVNEIAWNTTGELFFLTTGNAGTVEVLAYP
SLKVLHTLVAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI
SFNHTGEYIASASEDPFIDISNVQTGRSVHQIPCKAAMNSVEWNPKYNLLAYAGDDKNKY
QADEGVFRIFGFENNQHS
NT seq 957 nt   +upstreamnt  +downstreamnt
atggaagacaagtccctgagcttcaagaacctgagctccagagagtaccagggccacaag
aagaaggttcactcggtagcgtggaattgtttgggtacgaagctcgcgtctggctctgtt
gatcacactgctcgcgtctggaacatcgatccccacggtcatggcaaggtcaaagatatt
gaattaaaggggcatacggacagcgtagatcagctgtgctgggacccaaagcatcctgat
ttagttgcaactgcagctggggacaagactgtacgtctttgggatgctcgaagtggaaaa
tgctctcagcatgctgaacttagtggagagaatatcaatatcacctacaaacctgatgga
actcatatagctgttggaaataaggaggatgagcttacaatactggatgttcggaagttt
aaaccaatacataggcgcaaatttaactatgaggtaaatgagattgcatggaatacaact
ggagaactgttttttcttaccactgggaatgcaggtactgttgaggtacttgcttatccc
tctcttaaggtgcttcacactttggtggctcatacagcaggttgctattgcattgcaatt
gatcccataggaagatacttcgctgttggaagtgctgattcattggtcagcctatgggat
atatcagagatgttgtgcgtccgaacattcacaaagcttgaatggcctgtcagaaccatc
agctttaatcacactggagaatatattgcttcagccagtgaagatccttttattgatatt
tccaatgttcagactgggagatcagtgcatcagatcccctgtaaggcagcaatgaacagt
gtggagtggaaccctaaatacaacttactggcttatgcaggagatgataagaacaaatac
caagctgatgaaggtgtgttccggatatttggttttgagaacaatcagcattcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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