KEGG   Elaeis guineensis (African oil palm): 105053848
Entry
105053848         CDS       T03921                                 
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
  KO
K12590  exosome complex component RRP46
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105053848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105053848
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105053848
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 105053848
NCBI-ProteinID: XP_010933463
UniProt: A0A6I9RWB5
Position
11:complement(25054010..25069073)
AA seq 240 aa
MEVVRADGRTPNQLRPLACSRNLLHRAHGSARWSQGDTIVLAAVYGPKAGIRKGENPEKA
SIEVIWKPKTGQTGKAEKEYEMILKRTLQSICLLAVHPNTTTSIILQVVGDDGALLPCAI
NASCAALVDAGVPLKHLAVAICCGLTEGGYVVLDPTKSEEQKMRAFAYLVFPNSSHSVLP
KAPSAVDEEPGIITSVTYGLMSESHYINCLGHGHAACAKISEFLRKSLQTQFPGDLSKGT
NT seq 723 nt   +upstreamnt  +downstreamnt
atggaggtggttagggcggacgggcgtaccccgaatcaactgagaccgctcgcttgttct
cggaatctgctccaccgagctcatggatcggctcgttggtcccaaggtgatacaattgta
ctggctgctgtttacggaccaaaagctggaattagaaagggcgagaaccctgagaaagcc
tctattgaagtaatttggaagcccaaaactgggcagactggcaaagcagaaaaagagtat
gagatgatcttgaagagaactttgcaaagcatctgcctgttggcagtccatccaaatact
acaacctctatcatacttcaggttgttggtgatgatggtgctcttctcccatgtgccatt
aatgcatcctgtgctgcacttgtggatgctggtgttcctttaaaacatcttgctgttgca
atctgttgtggtttaacagagggaggttatgtagttttagatccaaccaaatcagaagag
cagaaaatgcgagcctttgcttatttggtgtttccaaattcctcacattctgttcttcct
aaagcaccgtcagctgtggatgaggaacctggaatcataacatctgtcacctatgggcta
atgtcggagagtcattatatcaactgccttggacatggccatgctgcatgtgccaagatc
tcagaatttcttaggaaaagcttgcagacacagttcccaggtgacctttcaaaaggcaca
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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