KEGG   Entamoeba histolytica: EHI_197850
Entry
EHI_197850        CDS       T00238                                 
Symbol
197.t00012
Name
(RefSeq) DNA repair helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
ehi  Entamoeba histolytica
Pathway
ehi03022  Basal transcription factors
ehi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EHI_197850 (197.t00012)
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHI_197850 (197.t00012)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehi03021]
    EHI_197850 (197.t00012)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_197850 (197.t00012)
Enzymes [BR:ehi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     EHI_197850 (197.t00012)
Transcription machinery [BR:ehi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EHI_197850 (197.t00012)
DNA repair and recombination proteins [BR:ehi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EHI_197850 (197.t00012)
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII HBB AAA_19 T2SSE
Other DBs
NCBI-GeneID: 3405129
NCBI-ProteinID: XP_650832
UniProt: C4M8K7
AA seq 770 aa
MEVINEKEQQSIIFTVNGIEIHFPYQFIYPEQYQFIKTVTSGVTNNKKPPHKQIIIEMGT
GTGKTVSIITAAKGLLDNQGSNISHTIYCTRTIDEIKQIFNELTKLSIPSVVLASRAHLC
LLDDVRESKHSQLKCQEKRDKGLCPYYHDIEDEIPIVAGIDELVQFGKQHQRCPYFCSRN
NFYKSPFIVCTYNYILDPKVENVTVGKMSDLHQTLLVFDEAHNVDNVVVDAQTLTLSLDT
LELATISLVRLTKLLSIEESKKPLKNEYKRLVEGLRHSEPTKRIEEENNIPIDTTTSIQF
VVLMNDIVNFFREKLREAHIHKKQHINEHCSIPIKNIVDSFCNSLALTPEIVSLIPLRLH
LLIKALGDEYGGRQDVKGDSFYYDDLYLVADFAALLCSCQEGFSYVPDVVKMDKDNCFHS
VLNLICVDAAHAIQPILNKFHSIIFTSGTLSPLKTYINILGLNNVVEEKQITSSFSSMRR
ICPLFVTKGFDSISITSQSSDTPGTEIKQDRILFSSQYAYRTNRLIIHSYGRLILELSKT
VPDGILCFFPSYSYMNICISYWDEMKIIESIYSNKLIFVESNDSEETSLAFQNYRLACHT
GKGAILFCVTRGRLSEGINFTNHLARAVLIIGAPYLQSEILTIKERIEYLDNKKIISKDE
YLIFDAMRTCNQCVGRCIRGKNDYAVAIYADKRYKFNDNKIISSMPQWIVDALEKRFTDI
SADQSITLAKEFLMKMSYLFNNQTNLKLQKGKTIWTLEDIHKDQLVSFNE
NT seq 2313 nt   +upstreamnt  +downstreamnt
atggaagtaattaatgagaaagaacaacagagtatcatatttactgttaatggaattgaa
attcattttccataccaattcatttatccagaacaatatcaattcattaaaacagtaact
agtggagttacaaataataaaaaaccaccacataaacaaattattattgaaatgggtact
ggaactggaaagactgtaagtattatcactgcagcaaaaggattattggacaatcaagga
agtaacatttcacatacaatttattgtactcgtactattgatgaaattaaacaaattttt
aatgaactaacaaaattatcaataccatcagttgtactagcatcaagagctcatttatgt
ttattggatgatgtaagagaaagtaaacattcacagttaaagtgtcaagaaaaaagagat
aaaggattatgtccatattatcatgatatagaagatgaaataccaattgttgctggaata
gatgaattagttcaatttggtaaacaacatcaacgatgtccatatttctgttcaagaaac
aacttttataaatcaccatttatagtttgtacatataattatattcttgatcctaaagta
gaaaatgttactgttggtaaaatgagtgatttacatcaaacattacttgtttttgatgaa
gcacataatgtagataacgttgttgttgatgcacaaacactaacattatcattagataca
ttagaacttgcaacaatttcattagttcgtcttacaaaacttctttcaattgaagaatca
aaaaaacctttaaaaaatgaatataaacgacttgtagaaggtcttagacattcagaacca
acaaaaagaatagaagaagaaaataacattccaattgatacaacaacttctattcaattt
gttgttttgatgaatgatattgttaatttctttagagagaaattacgtgaagctcatata
cacaaaaagcaacatattaatgaacattgttcaattccaattaaaaatatagttgattca
ttttgtaattctttagcattaacaccagaaattgttagtcttattcctcttagacttcat
ttacttattaaggcacttggagatgaatatggaggaagacaggatgtaaaaggagattcg
ttttattacgatgacttatatcttgtagcagattttgcagcattactctgttcttgtcag
gaaggattttcttatgttcctgatgttgtaaaaatggacaaagacaattgttttcatagt
gtgttaaatttaatttgtgttgatgccgcacatgctattcaaccaatattaaataaattt
cattcaataatttttacgtcaggaacattaagtccattaaaaacgtatattaatattctt
ggcttaaataatgttgttgaagaaaaacaaataacatcttcttttagtagtatgagaaga
atttgtccattgtttgtaacaaaaggatttgatagtatttcaattacatcacaaagttct
gatactccaggaactgaaataaaacaagacagaattttattttcatcacaatacgcatat
agaacaaatagattaattattcattcttatggtagattaatactagaattatctaaaact
gtacctgatggtattttatgtttctttccaagttattcatatatgaatatttgtatttca
tattgggatgaaatgaaaattatagaatctatctactctaataaattaatatttgtagaa
tcaaatgatagtgaggaaacatctcttgcttttcaaaattataggttagcttgtcatact
ggtaaaggtgctatattattttgtgttactcgtggcagattatctgaaggaataaatttt
acaaatcatcttgctcgagctgttttaattataggagctccctaccttcaatcagaaatt
cttacaattaaagaacgaattgaatatcttgataataaaaagattatttcaaaagatgaa
tatttaatatttgatgctatgagaacttgtaatcaatgtgtgggaagatgtataagagga
aaaaatgactatgctgttgcaatatatgcagataaaagatataaatttaatgataataaa
attatttcttctatgccccaatggattgttgatgctttagaaaaaagatttactgatatt
tctgctgatcaaagcattacattagcaaaagaatttttaatgaaaatgagttatttattt
aataaccaaactaatttaaaattacaaaaaggtaaaacaatatggacattagaagatatt
cataaagatcaactcgtttcgtttaatgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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