KEGG   Elizabethkingia miricola: VO54_02417
Entry
VO54_02417        CDS       T03757                                 
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
elb  Elizabethkingia miricola
Pathway
elb02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:elb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    VO54_02417 (msbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:elb02000]
    VO54_02417 (msbA)
Enzymes [BR:elb01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     VO54_02417 (msbA)
Transporters [BR:elb02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    VO54_02417 (msbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Zeta_toxin AAA AAA_22 APS_kinase ABC_ATPase nSTAND3 AAA_16 AAA_25 RsgA_GTPase AAA_18 AAA_23 AAA_5 RuvB_N DEAD AAA_29 AAA_24 TsaE NACHT AAA_14 DUF5056 AAA_28
Other DBs
NCBI-ProteinID: AJW63877
Position
2581801..2583612
AA seq 603 aa
MNLYFRILKFAKPHQKYIYGSLFFNILYSLLQIASIGTLLPVLGILFGTEKQEIKGDGFS
DNLKRTLYTFINNEIEKHGSLNVLLWLCIITGVAFFLRNIVRYLGAYLLIFYRVGVTKDL
RGSMYRKILTLPVSFFSEQRKGDLMSRMSNDVGEVENNILGSLVDLVNSPFMLIGTLASL
FFLNPQLTLFSLLVLPVMGTLISLIGKSLKKDSHKAQNELGNVFSIVDETLKSAKIIKIF
NADKLLDNRFTGSMTKWINHSISLGRKRELASPMSEFLGAITFLIITWYGGYQILVNKNM
QPQDFLVFLGMFFQILPPAKSLATSISNIQKGEASLVRVMDILDADVKVDEIANPIPVSE
LKDRIEFKNVGFYYNKENLILKNFNLSIPKGSTVALVGQSGSGKTTIANLLARFYDVTEG
TITVDGNNIKDLKLKEYRAILGMVTQESVLFNDTIYNNIAMGKENATREEIIEAAKIANA
HQFIESLPDGYETNIGDDGNKLSGGQKQRVSIARAVLKNPPIMILDEATSALDTESERFV
QEALEKMMENRTSLVIAHRLSTIQKADWIVVMERGVIVEQGTHHNLMDNNSVYRKLVDLQ
NFD
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaacttatactttaggattctaaaatttgctaaaccacaccaaaaatatatttacggg
agtttattcttcaacattttatactctctacttcagatagcatccatcggaacgctttta
cctgtactgggaatactcttcggtacagaaaagcaggaaataaaaggcgacggtttttct
gacaaccttaaaaggacgctctacacttttattaataatgaaatagaaaagcatggcagt
ttaaatgtattgctttggctttgtattattaccggcgttgctttctttctgagaaacatt
gtccgttatcttggggcttaccttctgatcttctaccgcgttggagtaacaaaagatctt
agaggatctatgtacagaaagattcttacgcttcctgtatctttcttttcggagcaaaga
aaaggagatcttatgtccagaatgtctaatgatgtcggcgaagtagaaaataatattctg
ggaagccttgtagacctcgtaaactcaccgtttatgttaataggtacactggcttcttta
ttctttttgaatccacagttaacacttttcagtttacttgtattacctgtaatgggaaca
ttaatttctcttatagggaaaagtctgaaaaaggattctcacaaagcacagaatgaattg
gggaatgttttctccatcgtagatgaaacactgaagtccgcaaagattattaagattttc
aatgccgataagttactggataatcgttttactggttctatgaccaaatggatcaatcac
tccatcagccttggcagaaaaagagagctagcctctcctatgagtgaattcttaggagct
attactttccttattattacatggtacggaggttaccagattctggtaaataagaatatg
cagccacaggactttttagtttttctgggtatgttctttcaaattttacctcctgcaaag
agcttagcaacatctatatccaatatccaaaaaggtgaagcgtcgcttgtaagagtaatg
gatatattagatgccgatgttaaggttgacgaaatagcgaatccgattccggtttctgag
ctgaaagatcgtattgagttcaaaaacgtaggtttctattataacaaggaaaatctgatt
ctgaaaaactttaatcttagtattccaaaaggcagtactgttgctctggtaggacaaagt
ggtagcggaaaaacaacgatagccaaccttctggctcgtttctatgatgtaactgaaggc
actataacagtagacggcaacaatattaaagacttgaaattaaaggaataccgagctatt
ctgggtatggtaactcaggaatcagtattattcaatgatacaatctataacaatattgcc
atgggtaaagaaaatgctacccgtgaggaaattattgaagcggcaaaaattgctaatgca
catcagtttatagaaagtcttcccgacggctatgaaaccaatattggagacgatgggaac
aagctatccgggggtcagaaacaaagagtatcaatagcccgtgccgtgctgaagaatcca
ccaatcatgattctggatgaagctacatcagctctggatacagagtctgaacgttttgta
caggaagctttggaaaaaatgatggaaaacagaacctctctggtgattgcccacagactg
tcgacaatccagaaagcagactggatcgttgtgatggaaagaggtgttattgttgagcag
ggtacccatcataatctgatggacaataatagtgtataccgtaaattagtagatcttcag
aactttgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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