KEGG   Enhydra lutris kenyoni (northern sea otter): 111146203
Entry
111146203         CDS       T05871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX58
  KO
K12646  ATP-dependent RNA helicase DDX58 [EC:5.6.2.6]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04064  NF-kappa B signaling pathway
elk04622  RIG-I-like receptor signaling pathway
elk04623  Cytosolic DNA-sensing pathway
elk05160  Hepatitis C
elk05161  Hepatitis B
elk05162  Measles
elk05164  Influenza A
elk05168  Herpes simplex virus 1 infection
elk05169  Epstein-Barr virus infection
elk05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:elk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    111146203
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    111146203
   04623 Cytosolic DNA-sensing pathway
    111146203
 09160 Human Diseases
  09172 Infectious disease: viral
   05161 Hepatitis B
    111146203
   05160 Hepatitis C
    111146203
   05171 Coronavirus disease - COVID-19
    111146203
   05164 Influenza A
    111146203
   05162 Measles
    111146203
   05168 Herpes simplex virus 1 infection
    111146203
   05169 Epstein-Barr virus infection
    111146203
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:elk04054]
    111146203
Enzymes [BR:elk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     111146203
Pattern recognition receptors [BR:elk04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   111146203
SSDB
Motif
Pfam: CARD_2 RIG-I_C RIG-I_C-RD DEAD ResIII Helicase_C AAA_22 CCDC85 CBP110 Peptidase_S51 PNMA LRRFIP
Other DBs
NCBI-GeneID: 111146203
NCBI-ProteinID: XP_022357348
UniProt: A0A2Y9J8R1
Position
Unknown
AA seq 926 aa
MSAEDRRNLHAFRDYVMKTLDPTYILSYMAPWFKDDEVQRIQAEKNNKGTMEAASLFLKF
LLELQEEGWFRGFLDALGHAGYSGLYEAIETWDFQKIESLEEYRSLLKRLQPEFKTTVNP
KDILPKISQCLISQECEEIIQVCSNKGLMAGAEKMVECLLRSDKENWPKTLKLALEMEES
KFSELWIVDKDAKNVEPKVLEDDEMETSDIQIFYKEEPECQNLSQNSSPPSAASPTCTPL
KPRNYQLELALPAKEGKNTLICAPTGCGKTLVSLLICEHHLKKFPQGQKGKVVFFAIQLP
LYEQQKSTFSDYFEKLGYKVAGVSGVTAETVSVEQIVENNDIIILTPQILLNSLRNGTIP
SLSVFTLMIFDECHNTGKNHPYNMIMFNYIDQKLGGSSDPLPQVIGLTASVGTGDAKNTN
EAMEYICKLCASLDTAVIATVKDNLEELEEVAYKPQKFFRKVESRTTDRFKCIISQLMRE
TESLAKSIFDELENVSQIQNRSFGTQKYEQWIVSVQKACMVFQLPDKDEESRICKALYLY
TSHLRKYNNALIINEHARMKDALDYLKDFFADVRSAGFDETEQDLTRRFEEKLKELESVS
MDFSNENPKLKDLSFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSENSFLNPGIL
TGRGKTNQNTGITMNSQKCALDAFRTDGDKDKKILIATSVADEGIDIAECNLVISYEYVG
NVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKINIYKENMMNESILRLQTWNEAVFKEK
ILQIQMQEKFIRDSQAKVEPVPDKENKKLLCRKCKGFACYTADIRVVEDCHYPVVGDAFR
KCYVSKLHPKPKTFGHFEKKAKIFCARENCCHDWGIHVKYKTFEIPVIKIESFVVEDIAT
GAQKLYAKWKDFPFEKIPFDATEMSK
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgtcggccgaggatcggcggaatctgcacgccttccgggattatgttatgaagactctg
gaccctacctatatcctaagctacatggccccctggtttaaggacgatgaagtgcagcgt
attcaggctgagaaaaacaataagggcacaatggaggctgcctcactttttcttaagttt
ctattggagctccaggaagaaggctggttccgtggctttttggatgccctcggtcatgca
ggttattctggactttatgaagccattgaaacttgggatttccaaaaaattgaaagtcta
gaggagtacagatcgcttctaaagcgtttacaaccagaatttaaaaccacagttaatcca
aaagatatccttcctaaaatatcccaatgtttaattagtcaggagtgcgaagaaattata
caggtgtgttccaacaaggggctgatggcaggtgcagagaaaatggttgaatgccttctc
agatcagacaaggaaaactggcccaaaactttgaaacttgctttggagatggaagagagc
aagttcagtgaactgtggattgtagacaaagatgcaaaaaatgttgaaccgaaagttctt
gaggatgatgaaatggaaacttctgacatacagattttctataaggaagaaccagaatgc
cagaatcttagtcagaactcatctccaccctcagcagcctctcctacctgcacgcctctg
aagccaagaaattaccaactagagctcgctttgcctgctaaggaaggaaaaaacacatta
atatgtgctcctactggatgtggaaaaacccttgtttcccttcttatatgtgaacatcat
cttaaaaaatttccacaaggacaaaaggggaaagttgtcttttttgctattcaactccca
ctgtatgaacagcagaaatccacgttctccgattattttgaaaaacttgggtataaagtt
gcaggtgtttctggagtaacagctgagactgtgtcggtggaacagattgttgagaacaat
gacatcatcattttaactccacagattcttttgaatagccttagaaatgggaccattcca
tcactctctgtctttactttgatgatatttgatgaatgtcacaacaccggtaaaaaccat
ccttacaatatgatcatgtttaattatatagatcagaaacttggaggatcttcagaccca
ctgcctcaggtcattgggctgactgcctcggttggcactggagatgccaaaaacacaaat
gaagccatggaatatatctgcaaactgtgtgcctctcttgacacggcggtgatagcaaca
gtcaaagacaacttggaggaactggaagaagttgcttataagccccagaagtttttcagg
aaagtagaatcccggactactgacagatttaaatgcatcatatctcagctgatgagggag
acagagagtctggcaaagagtatctttgacgaactcgaaaatgtatctcaaattcaaaat
aggagttttggaacacagaaatatgagcagtggatcgtttccgttcagaaagcgtgcatg
gtgtttcagttgcccgacaaagatgaagagagcaggatttgtaaagccctgtatttgtac
acttcccacttgcggaaatataacaatgccctcattatcaatgagcatgcacggatgaaa
gatgctctggattacttaaaagacttcttcgctgatgtccgaagtgcaggatttgatgag
actgagcaggacctcactcgtagattcgaagaaaaactgaaggaactggaaagtgtttcc
atggatttcagcaacgagaaccctaaactaaaagatctctccttcatcttgcaagaagag
taccacttaaacccagagagtagaaccatcctctttgtgaaaaccagagcacttgtggat
gctttgaagaagtggattgaagaaaattctgagaacagctttctaaaccctggcatattg
actggacgtggcaaaacaaatcagaacacaggcattacaatgaattcacagaagtgtgca
ttggacgcatttagaaccgatggagataaagataaaaagattctgattgccacttcagta
gctgatgaaggcatcgacattgctgagtgtaatttggtcatctcgtatgagtatgtgggc
aatgtcatcagaatgattcaaaccagaggcagaggaagagcaagagggagcaagtgcttc
cttctgaccagcaatgctgatgtaatcgaaaaagaaaaaataaacatatacaaggaaaac
atgatgaatgaatccattttaaggcttcagacgtggaatgaagcagtatttaaagaaaag
attctccagatacagatgcaagaaaaattcatcagggatagtcaagcaaaagtagaacct
gtacccgataaggagaataaaaaactgctttgcagaaagtgtaagggctttgcatgttac
acggctgacatcagagtggtagaggactgccattaccctgtggttggagatgctttcagg
aagtgctatgtgagcaaattacaccccaaaccaaagacctttgggcattttgagaagaaa
gcaaagatcttctgtgccagggagaactgctgccatgactggggaatccatgtgaagtat
aagacatttgagattccagttataaaaatagaaagctttgtggtggaggatattgcaact
ggagctcagaagctatatgcaaagtggaaggattttccttttgagaagataccctttgat
gctacagaaatgtccaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (33)   

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