KEGG   Escherichia coli W: ECW_m3937
Entry
ECW_m3937         CDS       T02002                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
elw  Escherichia coli W
Pathway
elw03420  Nucleotide excision repair
elw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:elw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECW_m3937
   03430 Mismatch repair
    ECW_m3937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elw03400]
    ECW_m3937
Enzymes [BR:elw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECW_m3937
DNA repair and recombination proteins [BR:elw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ECW_m3937
   MMR (mismatch excision repair)
    Other MMR factors
     ECW_m3937
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Viral_helicase1 UvrD_C_2 AAA_22 AAA_30 Zeta_toxin AAA_18
Other DBs
NCBI-ProteinID: ADT77275
UniProt: E0J5A4
Position
complement(4044354..4045979)
AA seq 541 aa
MSIFSPTTQQRLAIDYPKSMVITACPGSGKTTVIKEKIRNITGCLPEHKGVIAITFTRKA
SSELERRCKADGHDIKHSFFGTIDSFCLKEIIIPFLPRIWGGKPTECKVLKKLDSPYKYY
LEEHFFGIPSVVNVNEDPGYKRLYDEGMLWMSSFAALALKILNESPAATRYIKARYSHIF
IDEYQDSSLSQHQLFLKINELGLCSIAVGDVWQSIYEFRGGNAELLLDLVRDKQVFAHFE
INLNHRCHPSIINYASRLLDPNFVLLPSENINVYRKRLSGNLKDVSMTISSWISKWLNEG
KWGLEHANQIAIFARKEQSLLLLCSGLTSTFRVYIDTPLDKLGTECSDLYKDLLAYRYKA
IGTAQELIDKVFDGLIINDNQQFLLRKKIKSLRAKLTDEELINKLHEIAEMLNIQFSISN
DNAVLDIISDDIYLKQFMPSDKNEVQVMTLHKSKGLEFKIVLHLDMDEWSFPYRTVNEVD
RNTALYPSLPQETNLHYVGITRAEKCCVLINAELRQNSTGAFKKSEASYFFKLPQLEGLY
R
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagcattttttcaccaaccactcagcaaagattagccattgattaccctaaaagcatg
gtaataacagcatgccctggtagcggtaaaactacagttataaaagagaaaattagaaat
attaccggttgtcttccggagcataaaggagtcattgctattactttcacaaggaaagca
agttcagaactggagcgcagatgtaaagccgatgggcacgatataaaacatagttttttt
ggtacgattgatagcttttgcttaaaggaaataatcattccatttcttcccagaatatgg
ggtggtaaaccaacagaatgtaaagtacttaaaaagctagattctccttataaatattac
ttagaggagcatttttttggaataccatcagtcgttaatgtcaatgaagatcccggctat
aagagactgtacgatgagggaatgctgtggatgagttcatttgctgccttagctttaaaa
atacttaatgaatctcctgcagcaacgcgatatatcaaagcaaggtatagccatatattt
atagatgaatatcaagattcatctttatctcagcatcaattatttctaaaaataaatgaa
cttggtttatgctctattgctgttggtgatgtttggcaatcaatttatgagtttcgaggc
ggaaatgctgaactgttacttgacttagttagagataagcaggtatttgcacattttgaa
ataaatttaaatcataggtgtcatccatcaataattaattatgcatctaggctactcgat
ccaaacttcgtgttattaccaagcgaaaatataaatgtttacagaaagagattatctggg
aacctaaaagatgtttcgatgacaatatcatcatggatttcaaaatggttaaatgaagga
aaatgggggttggagcatgctaaccaaatagctatttttgcaagaaaagagcaatcatta
ctattattatgctcaggattaacatcaacttttagagtttatattgatacgccattagat
aaattgggcacagaatgttcagatttatataaagaccttctagcgtataggtataaggct
ataggcactgcgcaagaattaattgataaagtatttgatggcttgattataaatgacaat
cagcagtttttattaagaaaaaaaattaaatccctcagggctaaattaacagatgaggaa
ctaattaataagctccacgaaatcgctgaaatgctaaatattcagttttctatatctaat
gataatgcagttttggatattatatcagacgatatttacttaaaacagtttatgccatca
gataaaaatgaagttcaagtaatgacacttcacaagtctaaaggacttgaatttaaaata
gtattgcatttggatatggatgaatggtcttttccatatagaacagtgaatgaagttgat
agaaacacagcactatatcctagccttccgcaagaaacaaaccttcattatgttggtatt
acaagagctgagaaatgctgcgtattaattaatgcagagttacgccaaaactcgactgga
gcatttaagaagtctgaggcatcttactttttcaagttgccccaactagagggtctttat
cgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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