KEGG T05353: C1192

Escherichia marmotae: C1192_07765

Entry

C1192_07765       CDS       T05353

Name

(GenBank) serine--tRNA ligase

K01875

seryl-tRNA synthetase [EC:6.1.1.11]

Organism

ema Escherichia marmotae

Pathway

ema00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ema00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    C1192_07765
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ema01007]
    C1192_07765
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ema03016]
    C1192_07765
Enzymes [BR:ema01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     C1192_07765
Amino acid related enzymes [BR:ema01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   C1192_07765
Transfer RNA biogenesis [BR:ema03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    C1192_07765
Prokaryotic type
    C1192_07765

SSDB

Motif

Pfam:

tRNA-synt_2b Seryl_tRNA_N Filament CENP-F_leu_zip UPF0242 Cep57_CLD_2 DUF3450

Other DBs

NCBI-ProteinID:

AUT27019

Position

complement(1477970..1479262)

AA seq 430 aa
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN
VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV
PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR
PYMNGLEYIG

NT seq 1293 nt +upstreamnt +downstreamnt
atgctcgatcccaatctgctgcgtaatgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataagctgggcgctcttgaagagcgtcgtaaagtattg
caggtcaaaacggaaaacctgcaagcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatattgagcctttacgtctggaagtgaacaaactgggcgaa
gagctggatgcagcaaaagccgagctggatgctttacaggctgaaattcgcgatatcgcg
ctgacaatccctaacctgcctgcagatgaagtgccggtaggtaaagacgaaaatgacaac
gttgaagttagccgctggggcaccccgcgcgagtttgactttgaagttcgtgaccacgtg
acgctgggtgaaatgcactcaggtcttgactttgcagcagcagttaagctgaccggttcg
cgctttgtggtgatgaaagggcaaatcgctcgcatgcaccgtgcgctgtcgcagtttatg
ctggatctgcacaccgagcagcatggctatagcgaaaactatgtcccgtatctggttaac
caggacacgctgtacggtactggtcagttgccgaaatttgctggtgacctgttccatact
cgtccgctggaagaagaagctgacaccagtaactacgcgctgatcccgacggcggaagtt
ccgctgaccaacctggtgcgcggtgaaatcatcgatgaagatgatctgccaattaagatg
accgcccatacaccgtgcttccgttctgaagctggttcttatggtcgtgacactcgcggc
ctgatccgtatgcaccagttcgacaaagttgaaatggttcagatcgtgcgtccggaagac
tctatggcggcactggaagagatgaccggtcatgcagaaaaagtcctgcaactgctgggt
ctgccgtaccgtaaaatcattctttgcactggcgacatgggctttggcgcttgcaaaact
tacgacctggaagtatggatcccggcacagaacacctaccgcgagatctcttcctgctct
aacgtctgggatttccaggcacgtcgtatgcaggcacgttgccgcagcaagtcagacaag
aaaacccgtctggttcataccctgaacggttctggtctggctgttggtcgtacgttggtt
gcggtaatggaaaactatcagcaggctgatggccgtattgaagtaccagaagttctgcgt
ccgtacatgaacggactggaatatattggctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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