KEGG   Exaiptasia diaphana (Aiptasia): 110245187
Entry
110245187         CDS       T05080                                 
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPB-like
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03022  Basal transcription factors
epa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110245187
  09124 Replication and repair
   03420 Nucleotide excision repair
    110245187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epa03021]
    110245187
   03400 DNA repair and recombination proteins [BR:epa03400]
    110245187
Enzymes [BR:epa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     110245187
Transcription machinery [BR:epa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110245187
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110245187
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-GeneID: 110245187
NCBI-ProteinID: XP_020907109
Position
Unknown
AA seq 800 aa
MKSKKRKNDEGSVSKRAKKGKTQVDDDDCDDDNDDTESVGGEGEFIPKSSGAALKEETHE
DEYGARDYRQEVQLKNDHSSRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHI
HEYRLTAYSLYAAVSVGLQTSDIIEYLRRLSKTTIPEGIFNMLFNVXLCTLSYGKVKLVL
KHNKYYVESNHPDVLQTLLRDKVIQSCRKIPEQDDDMHRDSEEILISAKGARQSIKFPKT
NDKNGQESKESSSQGDVEQEKDAIPSDITDYIDKIDQDDEEEESQIYSFEIAQEQIEVXQ
KRCIELDFPLLAEYDFKNDSVNADLNMDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLP
CGAGKTLVGVTAACTVRKRCLVLCTSGVAVEQWRSQFKLWSTVDSRIICCFTSDAKDKPT
DCGIAISTYSMVSHTGKRSWEAEQVMSFLQNNEWGLMILDEVHTIPAKQFRRVLTVVQAH
CKLGLTATLVREDDKIQDLNFLIGPKLYEANWMELQNNGFIARVQCAEVWCPMSPEFYSE
YLAIRTRKRKLLYVMNPNKFRCCEFLIRYHERRNDKVIVFSDNVFALRNYAVKLNKPFIY
GPTSQGERINILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQISSHGGSRRQEAQRLG
RILRAKKDMAAEEYNAFFYTLVSTDTEEMYYSTKRQRFLVNQGYSFKVITSLAGMDEENL
NLSTKREQQELLQKVLAASDADAEEERTAGEVNQKNSGVTRRTGSMASMSGADDMSYLEF
RSSSKSTSLSRHPLFKKFRK
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgaagtcgaaaaagcgtaaaaatgatgaaggatcagtttcgaagagagctaagaaagga
aagacccaggttgatgatgatgattgcgatgatgataatgatgatacagaatctgtgggt
ggtgaaggagaattcatacccaaatcttcaggtgctgccctgaaggaggagactcatgag
gatgaatatggtgcaagagattacagacaagaggtacagctaaagaatgatcattcatca
agacctctttgggtggcaccagatggacatatatttttagagtctttttcgccagtttat
aaacatgctcatgactttcttattgccatttcagaacctgtctgtagaccagaacatatc
catgaatatcggcttactgcatactctctatatgccgctgtatctgttggcttacagaca
agtgatatcattgaatacttaagaaggcttagtaaaacaactattcctgaaggaattttc
aatatgctcttcaatgtttagttgtgtacattaagttatggcaaagtcaaactggtctta
aaacataacaagtactacgtggaaagtaaccatccagatgttttacagactctcctacgt
gataaagtgatacaatcttgcagaaaaataccagaacaagatgatgatatgcatagagac
agcgaagaaatattgatctctgccaaaggagcaagacagtctataaagttcccaaagaca
aatgacaaaaatggacaagaaagtaaagaaagttcatctcagggagatgtggaacaagaa
aaagatgcaattccttcagacatcacygattacattgataaaattgaccaggatgatgaa
gaggaggagagtcagatatattcttttgagatagcacaagagcaaatagaagttytwcag
aaaagatgcattgagctggactttccacttttggctgagtatgatttcaaaaatgactct
gtgaatgcagatctgaatatggacttaaaaccaactactgtattgagaccttatcaggaa
aaaagtctcaggaagatgtttggcaatggaagggctcgttctggagtgatagtcctgcca
tgtggagctggcaaaaccttggtgggggttacagctgcctgtacagttagaaaaagrtgt
cttgttttatgtacatcaggagttgctgttgagcagtggcgaagtcagttcaagctatgg
tcaacagtcgatagtcgtattatctgttgttttacatcagatgccaaagacaaaccaaca
gattgtggtattgcaatatctacctactctatggtgtcycatacaggcaagagatcatgg
gaagcagagcaggtgatgagttttcttcaaaacaatgaatggggtctgatgatattagat
gaggttcataccattcctgcaaaacaattccgcagagttctaacagttgttcaagcacac
tgcaaacttggtcttacagcaaccttagtcagagaagatgataaaatccaggatttgaat
tttctcattggaccaaaattgtatgaagcaaactggatggagcttcaaaataatggcttt
attgcaagagtacagtgtgcagaggtctggtgtcccatgtctcctgaattctacagcgaa
tatcttgctatcagaacacgaaagaggaagctcctctatgtgatgaatccaaataaattc
agatgytgtgaatttcttataagatatcatgaaagacgaaatgacaaagtgatagtattt
tctgacaacgtttttgcactgagaaattatgctgtaaagttgaacaagccgttcatctat
ggtcctacctcgcagggtgaaaggattaatattctacagaattttcagcacaayccttta
gttaacacaatattcatatccaaggttggcgataattcatttgatcttcccgaagctaat
gtccttattcagatctcgtcgcacggtggctcaagaagacaggaagcacagcgactggga
agaattcttcgagcmaaaaaagatatggctgcagaagaatacaacgcgttcttctacact
cttgtatcaaccgatacagaggaaatgtactaytcaacgaagcgtcaacggtttttggtc
aatcagggttacagctttaaagttataacaagcttggcgggaatggacgaggaaaatctc
aatttgtcgacaaaacgagagcaacaagaactattacaaaaggttcttgcagcaagtgat
gcagacgcagaagaggagagaactgctggggaagtaaaccaaaagaattccggcgttacg
aggcgaactggatcaatggcttccatgtctggtgcagacgacatgagttaccttgaattt
cgatcgtcatccaagtctacgtctcttagcagacatccattgttcaagaaatttagaaaa
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (59)   

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