KEGG   Exaiptasia diaphana (Aiptasia): 110254938
Entry
110254938         CDS       T05080                                 
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:epa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110254938
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:epa00536]
    110254938
Glycosaminoglycan binding proteins [BR:epa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110254938
SSDB
Motif
Pfam: Collagen COLFI WAP
Other DBs
NCBI-GeneID: 110254938
NCBI-ProteinID: XP_020917657
Position
Unknown
AA seq 1456 aa
MAVARAVIHLVVWGTLMSGIVQAQRPGICPTLPPPEECPSTPDNECLNDEQCSISLKCCS
DGCGLKCIEPLPPTPPPKRALVVIGPDGAPGFRGRKGARGPPGPPGETTGTGIKGRDGPR
GRRGRRGPRGLPGPPGPPGPAAVGGVQTYPGEKGPVFSPPIQYAHSAPIEDIQGPRGLPG
SRGLMGLQGVPGLPGPEGKPGIHGSRGDPGPVGFKGVRGYQGERGKKGKIGQPGFXGPKG
MIGEPGRDAFPGKNGHEGRRGRAGPAGDNGVEGEKGTEGESGEEGVRGQTGPEGRKGHVG
PIGPPGVMGSMGHRGLRGRPGGKGPTGNNGAPGKPGVVGAKGKVGESGEKGYAGVHGERG
DRGGRGVKGATGNIGKAGIPGRPGGKGIRGDRGGHGPTGVSGPNGLRGYDGSVGSRGASG
EMGDRGKNGIAGPVGNKGRSGRPGGWGKRGLSGGPGRRGARGDIGPGGPIGLPGDRGVSG
MQGLHGTDGPSGKKGARGRRGLRGPRGRKGDRGDTGPDGVTGDNGERGTRGRQGSEGRMG
YPGLIGKNGDDGSPGEDGLQGTSGPSGVAGLPGKKGDTGARGTVGNRGKRGRDGPKGKPG
EPGPMGDVGKRGITGAPGQFGEQGFEGPPGDTGPKGKPGNTGAPGDDGKTGMQGSRGLDG
LTGKQGSRGAEGSKGDPGDMGPQGLSGRPGSAGRQGPAGVSGQPGEMGAEGDIGKRGKKG
QAGQAGKPAAKGQRGEPGKSGGVGRDGEIGLAGLPGPDGKQGVPGPSGEKGEPGKDGKRG
LHGTMGDPGERGDMGGPGKQGFIGPPGPPGANGEQGTYGGKGLKGGQGDIGDVGLRGPPG
HSGDTGPQGSKGSTGDQGGEGEGGPHGPKGRSGPAGAEGEPGVPGKSGPDGLNGRKGVTG
VAGMPGERGDPGLEGQVGQIGXPGSGGDDGPAGVIGPMGKPGNPGSRGSQGLRGLKGQRG
LRGLDGTKGPRGDSATKGSSGKPGXEGKTGKRGARGRKGEGGENGPSGFAGXPGKDGLKG
IKGADGATGTAGQAGAQGAKGEQGGTGVRGLAGIDGMPGIGGFPGLKGNYGVPGLRGDQG
KTGDNGDTGNQGEKGDAGEEGRVGPRGIRGIKGPMGDAGEKGELGRPGARGPVGSPGSIG
SRGKIGPQGPPGPFGSRGKKGDRGTQGPEGQQGNIGPPGPPGIPATFSSRFSLEQLSRPA
LSTSKRERGRLYKSVTGAHAKDPEFLDITRQTDPVDAFLSLSIQLQIFKRPLGTRLYPAR
TCRDLKLGRPDLENGEYWIDPNDGTTDDAVLVFCDFNLNASCIFPNKTMTEKKKWFSGPD
GFKWFAQYFNGFQQFKYFSDPIQLMFLRLLSDHAQQNVTYHCRNSAAWYDZETGDYNKSI
KLQGHNGVELYASSTKKYKPTVLKDDCRIKDGSWRKTVLEIDTANTHRLPIIDVAVYDIG
DDNEEFGLEIGPVCFS
NT seq 4371 nt   +upstreamnt  +downstreamnt
atggcagtagctagagcagtgattcatcttgtggtatggggaactcttatgtcagggata
gttcaagcgcaaagacctggtatatgcccaacgcttcctccgcctgaagagtgcccgtct
actccagacaatgaatgcttaaacgacgaacagtgctctatttctctaaaatgttgctcg
gatggatgtggattgaaatgtatcgaacctctacctccgacgccaccgcctaaaagagct
cttgtagtaattggaccagacggtgctccaggatttcgtggtcgtaaaggagctcgtgga
ccaccagggccaccaggggaaactaccggtactggtatcaaaggacgtgatggtcctcgt
ggtcgtcgtggacgtcgtggtcctcgtggcctcccaggccctccaggtccccccggacct
gctgcagtaggcggggttcaaacatatcctggagaaaaaggtccagtattttcacctccg
attcaatatgctcattcggcaccaattgaggatatacaaggaccccgcggattacctgga
agtcgtggactgatgggattacaaggcgttcctggccttcctggacccgagggaaaacca
ggaatacacggctccagaggagatccaggccctgtcggtttcaaaggtgtacgtggatat
cagggtgagcgtggtaagaaaggcaagataggtcagccaggatttcmtggaccaaaaggt
atgattggagaacctggccgagacgcttttcccgggaaaaacggacacgaaggcagacgc
ggtcgtgctggtcctgcaggtgacaacggagtggaaggagaaaagggtaccgaaggagaa
tccggtgaagaaggagtacgtggtcaaactggtcctgaagggcgcaaaggtcacgtaggc
cctataggtccacctggagtaatgggatcaatgggacatcgtggactacgcggycggcca
gggggcaagggtccaaccggaaataacggagctccaggaaaacctggtgtagttggcgcg
aagggtaaagtgggtgaatcaggagagaaaggctatgctggtgtacacggagagagagga
gatcgaggaggtcgtggtgtcaagggtgctactggtaacattggcaaagctggaattcct
ggaagacctggtggcaagggaattcgtggtgatcgtggagggcatggtcctactggtgta
agtggaccgaatggactacggggatatgatggctcagtaggttcacgtggtgccagcgga
gaaatgggtgatagaggaaaaaacggaatagctggtcccgttggtaacaaaggacgatcg
ggaagaccaggtggctggggtaaaagrggactttctggaggccctggacggaggggagca
cgtggtgatatcgggcctgggggtcctattggtcttccgggtgacaggggtgtgtcgggt
atgcaaggtctccatggcaccgatggaccatcaggtaaaaagggggctcgaggacgacga
gggctacgaggtcctcgtggaagaaagggtgataggggtgatacaggtcctgatggcgtc
actggagacaatggggaaagaggtactcgtggtcgacagggctcggaagggcgtatggga
tatcctgggctaatcggtaaaaacggtgacgatgggtctcctggtgaagacggccttcag
ggaacttctggaccaagtggtgtcgctggtcttcctggcaagaaaggagatacaggtgcc
agaggaacagttggcaatcgtggaaagcgtggtagagatggtcccaaaggcaaaccaggc
gaacctggaccaatgggagatgttggcaaacgaggaataacgggagccccaggacagttt
ggtgaacaaggttttgagggacctcctggagatacgggacccaaaggaaaaccagggaac
accggagcgccaggagatgatggaaagacaggcatgcagggttcccgtggcctggatgga
ctgaccggaaaacagggaagtcgaggagcggagggaagcaagggagaccctggcgatatg
ggaccgcaagggctttcgggaagacctggttcagcaggacgtcagggtccagccggtgta
tcaggtcagcctggtgagatgggggcagaaggtgacatcggaaagcgcggtaagaaaggc
caggcaggccaggcaggaaaaccagcagctaaaggccaaagaggtgaacctggaaaatct
ggaggtgttggtcgcgatggagaaatcggtttagcgggtctcccaggccctgacggtaaa
cagggcgtgcctggtccctcgggcgaaaagggcgaacccggtaaagatggtaagcgtgga
cttcatggtaccatgggggatcccggggaacgaggagacatgggagggcctggaaaacaa
ggttttattggaccaccgggtccacctggtgctaatggcgaacaaggaacgtatggagga
aaaggcctcaaaggtggtcaaggtgatatcggtgatgttggtttgcgtggaccaccagga
cactcgggtgatactggacctcaaggatccaagggaagcacaggtgatcagggcggtgag
ggtgaaggaggacctcatggaccaaaaggcaggtcagggccagcaggggcagagggcgaa
cctggagttcctggcaaatctggtccagacggacttaatggtcgtaagggagttactgga
gtagcaggtatgcctggagaaagaggagaccctggactagaaggtcaagttggtcaaatc
ggtycgcctgggagcggaggcgacgacggaccagcgggcgttataggtcccatgggaaag
cccggcaatccaggatcaagaggaagccagggcttacgtggtttgaaaggacaaaggggt
ttacgaggcctcgatggcacgaagggaccacgtggcgatagtgcaacgaagggaagctct
ggaaaacctggacyagaggggaaaacaggaaaacgtggagctcgtggtagaaaaggcgag
ggtggcgaaaatggtccgtctggctttgctggtrgtccaggcaaagatggcttgaaagga
ataaagggcgcagatggagcaacaggaacygccggmcaagctggtgcacaaggtgccaag
ggggaacagggaggaaccggtgttcgtggccttgctggtattgatggaatgccgggaatt
ggaggatttccaggactgaaaggaaattatggtgtgcctgggttacgtggagaccaaggc
aaaaccggagataatggtgacaccggcaatcagggagaaaagggtgatgctggtgaagaa
gggcgtgttggtccacgtggaataaggggaattaagggacctatgggggatgccggtgaa
aaaggagaattaggtcgacctggcgcaagaggtcctgttggttctcctggttctattgga
tcccgcggaaagattggacctcagggacctcctggaccattcggtagtcgaggtaaaaag
ggtgaccgaggaacccagggtccagaaggacagcagggtaatatcggacctcctggacca
cctggaataccggccactttcagctcccgtttttcgctggagcaattaagycgtcccgct
ctatcaacctcaaagagagaaagaggacgattgtataaaagcgtaacgggagcacacgct
aaagatccagaatttttagatatcacacggcaaaccgatcctgtggacgcattcctttcc
cttagcattcaacttcaaattttcaagagacctcttggtaccagactttaccctgccaga
acatgccgtgatcttaagttgggtaggcccgaccttgaaaacggtgaatactggattgat
ccaaatgatggaacaacagacgatgccgtrctggttttctgtgattttaatctaaacgcg
tcttgtatattccccaataaaactatgacagagaaaaagaaatggttctcaggacccgat
ggcttcaaatggttcgcccaatatttcaacggcttccaacaatttaagtatttctcggat
cctatacaactgatgttccttcgtctactaagcgaccacgcccaacaaaatgtcacgtat
cattgccgtaactccgcggcttggtacgacsaggagactggagactacaataaatccatt
aaacttcaaggacataatggtgttgaactgtatgcatctagtaccaagaaatataaaccc
actgtcttaaaggacgactgccgtattaaagatggtagttggcgcaaaacagtgctagaa
atcgatacagctaacacgcatcgccttcctatcattgacgtagcagtctatgacattgga
gacgacaacgaagaatttggacttgaaattggaccagtttgcttctcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (167)   
   KEGG ORTHOLOGY (1)   
   RefGene (163)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (180)   

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