KEGG   Erwinia pyrifoliae DSM 12163: EPYR_00191
Entry
EPYR_00191        CDS       T02121                                 
Symbol
rhlB
Name
(GenBank) putative ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
epr  Erwinia pyrifoliae DSM 12163
Pathway
epr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:epr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EPYR_00191 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epr03019]
    EPYR_00191 (rhlB)
Enzymes [BR:epr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EPYR_00191 (rhlB)
Messenger RNA biogenesis [BR:epr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EPYR_00191 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: CAY72483
Position
complement(210678..211970)
AA seq 430 aa
MSKTHLTEQKFSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSHPAPEGRQVNQPRALILAPTRELAVQIHADAEPLAQISGLKIGLAYG
GDGYDKQLKVLESGVDVLIATTGRLIDYAKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSFRVRELAFENMNNAEYVEVEPDQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRTIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLA
CEEYALNLPAIEEYIGHSIPVSRYNSDALMGDLPPPKRLTRNRSGNGPRRGGNNNRRSSA
PRSPNRKRSG
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcaccctcaggtg
atcgaagcccttgaaactaaagggtttcataattgcacgcctattcaggcgctggcatta
ccttttacgctctccgggcgtgatgtagcaggtcaggcgcaaacaggtaccggcaaaacg
atggcgtttctgacgtcaacgttccatcatcttctttctcaccccgctccggaaggccgt
caggttaaccagccccgcgcgctaatcctcgccccaacgcgcgaactggcggtacagatc
catgcagacgccgagccgctggcacagatatcgggcctgaagatcggcctggcctatggc
ggagacggttatgataaacagctaaaagtactggaaagcggtgtcgatgtgctgatcgca
acaacgggccgtttaatcgattacgctaaacaaaatcacgtcaacctgggcgccatccag
gtagtggtactcgacgaagctgaccgtatgtttgacctcggcttcattaaagatattcgc
tggttattccgtcgcatgcctgccgctaaccagcgcctgaatatgctgttctccgccacc
ctgtcgttccgcgtacgcgagctggcgtttgagaacatgaacaatgccgaatacgttgaa
gtcgaaccggaccagaaaaccgggcatcgtattaaagaagaactgttctacccctccaac
gaagaaaaaatgcgtttgctgcaaacgctgattgaagaagagtggccggatcgcaccatc
atcttcgccaataccaagcatcgttgcgaagatatctggggccatctggctgctgatggc
catcgtgttggcctgctgaccggcgatgtcgcgcagaaaaagcgcctgcgcatccttgat
gacttcaccaaaggtgatgttgatattctggtggccaccgacgtggccgcacgcggtctg
cacattcccgcagtgacccacgtctttaactacgacttgcctgacgaccgtgaagattac
gtacaccgtattggtcgcaccgggcgtgcgggcgctaacggtcattctattagtcttgcc
tgtgaagagtacgcgctgaacctgccggccatcgaagagtatatcgggcacagcattccg
gtcagccgttataacagtgatgcgctgatgggcgaccttccgccgccgaagcgtttgacc
cgcaaccgttcaggtaatggcccgcgtcgtggcggtaacaataaccgccgcagcagtgca
ccgcgtagccctaaccgcaaacgttcaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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