KEGG   Erysipelotrichaceae bacterium I46: A4V01_18580
Entry
A4V01_18580       CDS       T04439                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
erb  Erysipelotrichaceae bacterium I46
Pathway
erb03030  DNA replication
erb03410  Base excision repair
erb03420  Nucleotide excision repair
erb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:erb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A4V01_18580 (ligA)
   03410 Base excision repair
    A4V01_18580 (ligA)
   03420 Nucleotide excision repair
    A4V01_18580 (ligA)
   03430 Mismatch repair
    A4V01_18580 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erb03032]
    A4V01_18580 (ligA)
   03400 DNA repair and recombination proteins [BR:erb03400]
    A4V01_18580 (ligA)
Enzymes [BR:erb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A4V01_18580 (ligA)
DNA replication proteins [BR:erb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A4V01_18580 (ligA)
DNA repair and recombination proteins [BR:erb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A4V01_18580 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4V01_18580 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     A4V01_18580 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A4V01_18580 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT RNA_ligase
Other DBs
NCBI-ProteinID: ANU70794
UniProt: A0A1C7HVX0
Position
complement(3779133..3781130)
AA seq 665 aa
MSQQRILELRSILDRLAYEYYVLDQPSKSDQEYDRYYQELVALEDEFPQYRDPNSITQRV
GGVVLDAFTKVEHKRTMLSLGNAFNLKDLHAFDERVREVVPNARYVVELKIDGLAMSLIY
RDGRFVQALTRGDGVVGEDVTHNVKTIPSIPMHIPLQGEVEVRGEVYMPNASFQMLNEER
EKNGEELFANPRNAAAGSIRQLDSSVAAKRKLDAFWYYFVNAQEYDIHSHEEALQKMSEM
HLRVNPLRKVCERIDEVWQFIEEITEQRNDLPYAIDGMVIKVDDLDAQNRLGSTVKVPRW
AIAYKFPAEEVITKLLDIVVTVGRTGRITPNAVLEPVRVAGTTVSAAQLHNEDMIKEKDI
RIHDDVVVRKAGDIIPEVVRPLLERRNDTQAVYHFPTHCPICGSELVRFPEEAAHYCINQ
DCPARVVESMIHFASRDAMDIDTLGDKKVEFFHKQGFLNTIEDIYCLKEHRQELINLEGF
KEKSVDKLLDAIEDSKQNPLEDLIYGLGIRQVGKKAAKVLAKHFLSMDALMAANEEELVA
IKDIGQITAESITAFFHEPKNMELIAHLKGYGLRMDTEAEQIQESSFSGKTIVLTGTLTQ
MTRNDAKALLESLGANVSGSVSKKTDLVIYGEAAGSKLTKANSLGVMTMDEDTFMKEVNG
NELET
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgagtcagcagaggattttagaattacgaagtatattggacaggctggcgtacgaatat
tacgtactggatcagccaagtaaaagcgatcaggaatatgaccgctactatcaggagctg
gtggcactggaggatgaattcccacagtaccgcgaccccaactccattacgcagcgcgtt
ggcggtgtcgtcctggatgcattcacgaaggtggagcataagcgcaccatgctgagtctg
ggcaatgccttcaatctgaaggatctgcatgcctttgatgagcgtgtgcgggaagtggtg
ccaaacgcacgctatgtggtggagctgaaaattgacggacttgccatgtccctgatttat
cgcgacgggcgctttgtacaggcactgacccgcggagacggtgttgtcggtgaggatgtt
acgcacaatgtcaaaacgatcccatccattccgatgcatatcccgctacagggtgaggtg
gaagtgcgcggagaggtgtatatgcccaatgccagctttcagatgctgaatgaggaacgg
gaaaagaacggggaagaactgtttgcgaatccgcgaaatgcggcggcgggaagtatccgt
cagctggacagctcggttgcggcaaagcgtaagctggatgccttctggtattactttgtg
aatgcacaggaatacgatattcattcccatgaagaggcactgcagaagatgagtgaaatg
catctgcgggtgaatccgcttcgtaaggtgtgtgagcgcatcgatgaggtgtggcagttt
atcgaagaaattacagagcagcgaaatgatctgccctacgcgattgacggtatggtcatc
aaggtggatgatctggacgcacaaaaccgtctgggctccacggtcaaggtgccgcgctgg
gcgattgcatataaatttccggccgaagaggttatcacaaagctgctggatatcgtggta
acggttggaagaacgggacggattactccgaatgccgtactggagccggtgcgggttgcg
ggtacaacggtatcggcggcacagctgcacaatgaggatatgattaaggaaaaggacatc
cgtattcatgatgatgtcgtggtgcgcaaggccggagatatcataccggaggtcgttcga
ccgctgcttgagcgaagaaacgatacgcaggcggtttatcactttccaacacactgcccg
atctgcggaagtgagctggtacgctttcctgaggaagctgcccattactgcatcaatcag
gactgccccgcccgtgttgtggaaagcatgattcattttgcgagtcgggatgcgatggat
atcgatacactgggtgataagaaagtggaatttttccataagcagggctttttgaatacc
attgaagatatatactgcctgaaggagcatcgccaggagctgatcaatctggagggcttt
aaggaaaagtcggtagataagctgctggatgccattgaggacagcaagcagaatccgctg
gaggatctgatctatggactgggcatccgtcaggtcggcaagaaagccgcaaaggttctg
gcaaagcattttctgagcatggatgcactgatggcagcgaatgaggaagagcttgtggca
atcaaggatatcggacagattacggcagagagcatcaccgcctttttccatgagccgaag
aacatggagctgattgcccatttaaagggctatggtctgcggatggataccgaggctgag
cagattcaggaaagctcattcagcggcaaaaccatcgtactgaccggtacgctgacgcag
atgacacgaaatgatgccaaggcgttgctggaatctctcggggccaatgttagcggctct
gtttccaaaaaaaccgaccttgtcatttacggcgaggcggccggcagcaagctgacaaaa
gcgaattccctcggtgtcatgacgatggatgaggatacctttatgaaagaggtgaacgga
aatgaactggaaacctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (83)   

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