KEGG   Sinorhizobium sojae: SJ05684_c35650
Entry
SJ05684_c35650    CDS       T05052                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
esj  Sinorhizobium sojae
Pathway
esj03030  DNA replication
esj03430  Mismatch repair
esj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:esj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SJ05684_c35650
   03430 Mismatch repair
    SJ05684_c35650
   03440 Homologous recombination
    SJ05684_c35650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:esj03032]
    SJ05684_c35650
   03400 DNA repair and recombination proteins [BR:esj03400]
    SJ05684_c35650
Enzymes [BR:esj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SJ05684_c35650
DNA replication proteins [BR:esj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SJ05684_c35650
DNA repair and recombination proteins [BR:esj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SJ05684_c35650
SSDB
Motif
Pfam: DNA_pol3_gamma3 DUF3646 DNA_pol3_delta2 AAA AAA_22 AAA_16 AAA_30 AAA_5 AAA_14 AAA_19 AAA_24 RuvB_N AAA_18 SKI TsaE SRP54 AAA_assoc_2 DUF815 Rad17 CbiA RNA_helicase AAA_28 nSTAND3 AAA_2 AAA_7
Other DBs
NCBI-ProteinID: ASY64980
UniProt: A0A249PG93
Position
3537340..3539226
AA seq 628 aa
MSDEAPISSPVSLPVSPAEKPAAYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIA
QAYMLTGVRGVGKTTTARILARALNYKTAEIDKPTIDLRVPGEHCQAIMDGRHVDVIEMD
AASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIF
ATTEIRKVPITVLSRCQRFDLRRIGASDLVGLFSTILNKEAVPFDPEALAMVARAAEGSA
RDGLSLLDQAIAHGGGAVEVETVRSMLGLADRARIVDLFAHIIKGDAAAALGEFSAQYEA
GANPTVVLTDLADFTHLVTRMKYVPEAANDQSLSEIERTRGAEFAGGVAVTTLSRIWQML
LKGIPEAESSARPAGAAEMVLIRLAHAAHLPSPEEAARRLLELSGNDAGGRPVPPRSGGG
PQPQAGPSVEARSVEPAPVQRPSGSGATMLRAVSDSVPQPIGVGRLEESPAAAPAAKPQP
RVSVNSISDIADLCGKNRDIKLKTLVRGFLRLVYIEPGRLDVNLPDDAPKTLLGELAVKL
KEWTGIHWVVSYSREPGEPTLVEAEQRAQEERVNDARQDPDVAAILARFPGARITDVRIR
AAEEEAESLAPATAESEDGDIVPGDDIE
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgagcgacgaagcgcctatttcatcccccgtttcacttcccgtttcgcccgccgagaaa
ccggccgcctatcgcgtcctggcacgcaagtatcgccccaaggatttctccgatctcatg
gtcggccaggaaccgatggtgcgcacgctcaccaacgccttcgagaccggccgcatcgcc
caggcctacatgctgacgggcgtgcgcggcgtcggcaagaccacgactgcgcgtatcctg
gcgcgcgccctgaactacaagaccgcggagatcgacaagccgaccatcgacctgcgcgtc
cccggcgagcactgccaggcgatcatggatggccgccatgtcgacgtgatcgagatggac
gctgcctcccataccggcatcgacgacatccgcgagatcatcgagcaggtgcgctaccgg
cccgtctcggcccgctacaaagtctatatcatcgacgaagtgcacatgctctcgacgcag
gccttcaacggcctgttgaagacgctggaagagccgccggagcacgtgaagttcatcttc
gcgaccacggagatccgcaaggttccgatcacggtcctgtcgcgctgccagcgcttcgac
ctccggcgcatcggcgcctccgacctcgtcgggctgttttcgaccattctcaacaaggag
gccgtgcccttcgacccggaggcactggcgatggtggcgcgtgcagccgagggatcggcg
cgcgacggcctgtcgctgctggaccaggcgatcgcccatgggggcggggccgtcgaggtg
gaaacggtgcgctcgatgctggggctcgccgaccgggcgcgtatcgtcgacctcttcgcg
cacatcatcaagggcgatgcggcggcggcgctcggcgaattttcggcgcagtacgaagcc
ggcgccaatccgaccgtggttttgaccgatcttgccgacttcacccacctcgtcacccgg
atgaaatacgttcccgaggcggcgaacgaccagtccctgagcgagatcgagcgcacgcgc
ggtgcagaattcgcaggaggcgtcgcggtgacgacgctttcacgcatctggcagatgctt
ctcaaaggcattcccgaggcggaaagctccgcacggccggcaggcgccgccgagatggtg
ctgatccggctcgcccatgccgcgcatctgccctcgccggaggaggcggcgcggcggctg
ctcgagctttcgggcaacgatgccggcggacgcccggtgccgccccgcagtggcggcgga
ccccagccgcaggccggcccgtcggtcgaggcccgttccgtcgaacccgcgcccgtccag
agaccttcgggcagtggcgccaccatgctgcgcgccgtttcggattcagtgccgcagccg
atcggcgtcgggcgcctcgaggagagccctgcggcggcaccggccgccaagccgcagccc
agggtatcggtcaattcgatcagcgacatcgccgatctctgcggcaagaaccgcgacatc
aagctgaagacgctggtgcgcggtttcttaaggcttgtgtacatcgaacctggccggctc
gatgtcaaccttcccgacgacgccccgaagacgctgctcggcgaacttgcggtgaagctc
aaagaatggaccggcatccactgggtcgtcagctacagccgcgaaccgggcgagccgacg
ctcgtcgaagccgagcagcgcgcccaggaggagcgcgtcaacgatgcgcgccaggacccg
gatgtcgcggcgatcctcgcgcggtttcccggcgcccgcatcaccgacgttcgcatacgc
gcggccgaggaggaggcggaaagccttgcgccggcgacggccgagtccgaggacggagac
atcgtgccgggtgacgacatagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (38)   

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