KEGG   Echinicola strongylocentroti: DN752_09175
Entry
DN752_09175       CDS       T05506                                 
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
est  Echinicola strongylocentroti
Brite
KEGG Orthology (KO) [BR:est00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:est03009]
    DN752_09175 (rimO)
Enzymes [BR:est01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     DN752_09175 (rimO)
Ribosome biogenesis [BR:est03009]
 Prokaryotic type
  ribosomal protein modification factors
   DN752_09175 (rimO)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM CLP1_P
Other DBs
NCBI-ProteinID: AWW33112
UniProt: A0A2Z4IPW3
Position
complement(2390842..2392155)
AA seq 437 aa
MKARTLKKDKVNIITMGCSKNLVDSEVMLTQLKGNGINVSHESEQQDNNIVIINTCGFID
NAKQESIDTILQYVDAKERGLVEKVYVTGCLSQRYKDDLEKEIPLVDAFFGTRDLPALLK
KFKADYKHELVGERLLSHPSHYAYMKISEGCDRPCSFCAIPLMRGGHVSKPIEELVKEAE
HKAANGTKELLLIAQDSTYYGLDIYKKRRLADLMKALADVNGIDWVRLHYAYPTGFPMDV
IDVMAEHPNICNYLDIPLQHGSSDVLKVMRRGTTREKQEELIHRIREKIPGIAIRTTLIA
GHPGEGEKEFQEMVDFVERMKFERLGVFTYSHEEDTHAFGMNDDVPDEEKQARANYLMEV
QEQISFDLNQKRVGETFKVLVDKKENGYFVGRTEFDSVEVDNEVLIDASKHYCRVGDFVQ
VKVSEATEFDLYGDVID
NT seq 1314 nt   +upstreamnt  +downstreamnt
ttgaaggcgagaacattaaaaaaggacaaggtaaacatcatcaccatggggtgctccaaa
aacttggtggattcagaggtgatgttgacccagctaaagggcaacgggatcaatgtgtcc
cacgagtctgagcagcaggacaataatattgtcatcatcaatacctgcggttttatagat
aatgccaagcaagagtcgatcgataccattctgcaatatgtggatgccaaggagagaggt
ttggtagagaaggtgtatgtgacgggctgtctttcgcagcggtataaggatgatttggaa
aaggagattcccttggtggatgctttttttggtacgcgggaccttccagcattgctgaag
aagtttaaggcggattataaacatgagctggtaggggagcggctgctgagccatccatcg
cactatgcatatatgaaaatatccgaaggatgtgatcgcccttgttctttttgtgccatt
ccgctgatgcgtggtggacatgtttccaagccgattgaggagctggtaaaagaagcagaa
cataaagcagccaatggcactaaggaacttttgctgattgctcaagattccacctattac
gggttggacatttataaaaagcgacgtcttgccgacctgatgaaggcgctggccgatgtg
aatggcatcgactgggtgaggttgcattatgcctatcctacgggctttccgatggatgtg
atcgatgtgatggctgagcatcccaatatttgtaactacctggatatcccccttcagcat
ggatcatcagacgtgctcaaagtaatgcgccgtggtactacaagggagaagcaagaagag
cttatccaccgaattcgggaaaagatccctggaatagccatcaggacgactttgatcgcc
ggacatcccggagaaggagagaaggagtttcaggaaatggtggattttgtggagcgaatg
aagtttgagcggttgggtgtgtttacttattcgcatgaagaagatacgcacgcatttggt
atgaatgacgatgtgcccgatgaagaaaagcaagccagagccaattacttgatggaagtt
caagagcaaatttccttcgacctgaaccaaaaaagggtaggcgaaacctttaaggtgctg
gtggataagaaggagaatggatactttgtgggcaggacggaattcgactctgtagaggtg
gacaatgaagtgttgatcgatgcttcgaagcattattgtagggtaggggattttgtccaa
gtgaaggtgagtgaagctaccgaatttgacctttatggtgatgtcatcgattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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