KEGG   Empidonax traillii (willow flycatcher): 114071402
Entry
114071402         CDS       T05887                                 
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl04010  MAPK signaling pathway
etl04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:etl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114071402 (CACNA1B)
   04020 Calcium signaling pathway
    114071402 (CACNA1B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:etl04040]
    114071402 (CACNA1B)
Ion channels [BR:etl04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   114071402 (CACNA1B)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel
Other DBs
NCBI-GeneID: 114071402
NCBI-ProteinID: XP_027765031
Position
Unknown
AA seq 1505 aa
KQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRP
LVVEPRSEGRNNISKLSPGDVQEVQEHPKGSSADGAEAPRKHHRHREKEKEKQAEQEKGD
APKEESAEPAVPNKEERHRQHRSRSKEVEGGSKEGKSERNRGQEGGKRHHRRGSVDEGGE
KEHRRHRTHRHSTERQGKDGNGTANGARGERRSRHRGGSRSGNRDGEPKGENGEEPHRRH
RLRNRALSTYESVEKENGEKEAEAAEKEHRNHQPKENQCEIEASGSVSVPVHTLPSTYLQ
KVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKK
DVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAED
PVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGAL
VAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILI
VYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFH
YDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFF
VNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKF
VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV
LNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRI
LLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALML
LFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKK
CPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEI
SLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGP
VSLFHPLKATLEQSQSTAFSNAKAFLRQKSSASLNNGGALPAPEGGIKESSSWGTQRTQD
VFYETRTPAFERGRSEEIPIERVVEMREISPTVANGEPQPGLESQGRAASMPRLAAETQP
IPDTSPMKRSVSTLTPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRAA
HHLADGQAAAQAGESSAKDKKERGRSQERKQHSSSSSEKQRFYSCDRYGSRERSQPKSAE
QSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTA
NSSPVHFTTVQPGLPTFSPGRLSRDPPHTPSPALKPQPDDGLGSPPILRQNLKKNLKLSK
SPPAS
NT seq 4519 nt   +upstreamnt  +downstreamnt
caagcagcagaactcctccaaatccaagtcggtgtgggagcagaggaccagccagatccg
gatgcacaacttccgagccagctgcgaggccctgtacaacgagctggaccccgaggagcg
ggtccgctacgccaccaccctgcacatcaggccggacatgaagacccacctggaccggcc
gctggtggtggagcccaggagcgagggcaggaacaacatcagcaagctgagccctgggga
cgtgcaggaggtgcaggagcaccccaagggcagctccgccgatggggcagaagccccgcg
gaagcaccaccggcaccgggagaaggagaaggagaagcaggccgagcaggagaagggcga
cgcgcccaaggaggagagcgcggagcccgccgtgcccaacaaggaggagcggcaccggca
gcaccggagccgcagcaaggaggtggagggtggcagcaaggaagggaaaagcgagcggaa
cagggggcaggaaggggggaagaggcaccaccggcggggctcggtggacgaaggggggga
gaaggagcaccgcaggcaccgcacgcaccggcactccacggagcgccagggcaaggatgg
caacggcaccgccaacggcgcccgcggagagcggcgctcccggcaccgcggagggtcccg
ctctggcaacagggatggagagcccaagggggagaacggggaggagccccacaggcggca
caggctcaggaacagggccctgtccacctacgagtcggtggagaaggagaacggggagaa
ggaggcggaggctgcggagaaggagcaccggaaccaccagcccaaggagaaccagtgtga
gatcgaggccagtgggagtgtgagtgtccctgtgcacaccctgcccagcacttacctgca
gaaggtgcctgagcagccagaagacgccgacaaccagaagaacgtgacgcggatgattca
accccccctggacaaaaccaccactgtgaacatccccgtcaccatcacggccccaccagg
ggaaaccactgtcataccaatgaacaacgtggagtttgagagcaaaacagaggagaagaa
agacgttgatgacttgacgaaaaatgggcctaaaccaatcttgccttacagttccatgtt
catcctgagccccacaaacccgattcggcggctcttccactacatcgtcaacctgcgcta
cttcgagatggtcatcctgatcgtcatcgccctcagcagcattgccctggctgcagaaga
ccctgtccaagctgagtcacccagaaatgatgctctgaaatacttggattatatatttac
aggtgtctttacctttgagatggtgatcaagatgattgacctggggctgttactccaccc
tggctcctacttccgtgacctgtggaacatcctggacttcattgtggtcagtggggcctt
ggtggcatttgccttctcgagtttcatgggaggaaccaaaggcaaggacatcaacacaat
caagtccctgcgagttctgcgggtcctcaggcctctgaaaaccatcaaacggctgccaaa
actaaaggctgtctttgactgtgtggtgaactccctgaagaacgtcctcaacatcctcat
cgtttacatgctcttcatgttcatttttgccgtcattgctgtgcagctcttcaagggcag
attcttctactgcactgacgagtccaaggagctggagaaggactgcaggggtcagtacct
cgattatgaaaaaaatgaggtggaggcccagcccagggagtggaaaaaatacgagttcca
ctatgacaacgtgctctgggctctgctcacgctcttcaccgtgtccacgggggaagggtg
gccaaccgtgttgaagcactcggtggacgccacctacgaggagcagggtcccagccctgg
ctacaggatggaaatgtccatcttttacgtggtgtattttgttgtcttcccttttttctt
tgtgaacatctttgtggctttaatcatcatcaccttccaagagcaaggagataaagtgat
gtcagagtgcagcctcgagaaaaacgagagggcctgcatagactttgccataagtgccaa
gcccctgacccggtacatgccccagaacaagcaatccttccagtacaagatgtggaaatt
cgtggtgtcccctcccttcgagtattttatcatggtcatgattgccctcaacaccatcgt
cctcatgatgaagttctatgatgctccggaggcatatgaagaaatgctgaaatgcctgaa
tatcgtgtttacatccatgttttccatggaatgtgtgctgaagatcattgcctttggtgt
gctgaattatttccgagatgcctggaatgtctttgattttgtcacagtgttgggaagtat
tactgatattttagtaacagagattgcggacacggacaacttcatcaacctcagcttcct
gaggctcttcagggcagccagactcatcaaactcctccgccagggctacaccatccgaat
cctgctctggacatttgtgcagtcctttaaggccttgccttacgtgtgtctcctcattgc
aatgctcttcttcatctatgccattattggcatgcaggtatttgggaacattgcattaga
cgatgaaacctccattaatcggcacaacaacttccgtaccttcctccaagccctgatgct
tctgttcaggagtgccacgggggaagcctggcacgagatcatgttgtcctgcctgagcaa
cagagcctgtgaccccctctctggcctcaccaagaaggaatgtggcagtgattttgccta
tttctactttgtgtccttcatcttcctctgctccttcctgatgttaaacctgtttgtggc
tgtgatcatggacaactttgagtacctgacgagagactcctccatcctggggccgcacca
cttggacgagttcgtgcgtgtctgggctgagtacgaccccgctgcctgcggtcgcatcag
ttacacagacatgtatgagatgctgagacacatgtccccacctctaggccttggaaagaa
atgccctgctcgtgttgcctataagcgcctggtgaggatgaacatgccgatctcccccga
ggatctgactgtccacttcacatccacgctgatggccctgatcagaacggccctggagat
caaactggcctcaggtggagttaaacagcaccagtgtgatgctgagctgagaaaggagat
ctccctggtttggcccaacctgtcccagaagactctggatctgctggtgcctcctcacaa
acctgatgaaatgactgtggggaaggtctacgcagccctgatgatatttgacttctacaa
gcagaataagaacagcagggaacaagtccagccccctggaggcctctgccagcctggccc
agtgtccctgttccaccccttgaaggccaccctggagcaaagccagtccacagcgttcag
caacgccaaggccttcctgcgccagaagagctcggcctcgctcaacaacgggggtgcact
accagccccagagggtgggatcaaagagtccagttcctgggggacccagcgcacccagga
cgtgttttacgagaccaggacaccagcttttgagcgaggccgctctgaggagatccccat
cgaacgggtggtagaaatgagggaaatcagccccacagttgccaatggagagccccagcc
agggctggagagccagggccgggcggcctccatgccacgcctggctgccgaaactcagcc
catcccggacacgagccccatgaagcgctccgtgtccacgctgaccccgcagcgccctca
cgccatgcacctctacgagtactccctggagaggatgcccccggagcaggggcaccacca
ccaccaccaccgctgccaccggaggaaagagaagaagcagaagtccctggacagggccgc
ccatcacttggctgatggacaggctgcagcccaggctggtgagtcttctgccaaggacaa
gaaggagcgggggcggtcccaggagaggaagcagcactcctcctcctcctccgagaagca
gcgcttctactcctgcgaccgctacggcagccgggagcgctcccagcccaagtctgctga
gcagagcaggcccacctcccccaacggggggccagagcaaggtccacacagacagggcag
tggttcagttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccgggg
tcggaggcagctcccacagactccactgaccccacgccccagcatcacttacaagaccgc
taactcctcgcccgtgcacttcaccactgtccaacccggcctccccaccttctccccggg
acgcctgagccgcgaccccccccatacccccagccctgcactaaaaccacagccagacga
tggccttgggtcacccccaattcttaggcagaacctgaagaagaatctcaagttgtccaa
atccccccctgcctcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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