KEGG   Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4086
Entry
UMNK88_4086       CDS       T02001                                 
Symbol
gspD
Name
(GenBank) general secretion pathway protein GspD
  KO
K02453  general secretion pathway protein D
Organism
eun  Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:eun00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    UMNK88_4086 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eun02044]
    UMNK88_4086 (gspD)
Secretion system [BR:eun02044]
 Type II secretion system
  General secretion pathway protein
   UMNK88_4086 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Pro_Al_protease
Other DBs
NCBI-ProteinID: AEE58605
Position
3943758..3945722
AA seq 654 aa
MDCVMKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDP
SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS
SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK
LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT
NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK
GNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE
VQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYN
GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD
NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL
VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD
DDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSSR
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggactgcgtcatgaaaggactcaataaaatcacctgttgcttgctggcagcactactc
atgccttgtgcaggacacgctgagaacgaacaatacggcgcgaacttcaataacgccgat
atccgccagttcgtggaaatagtgggtcagcatcttggcaaaacgatcctgatcgaccct
tcggtacagggaaccatttccgtacgcagtaatgatacgtttagccaacaggagtactac
cagttctttttaagtattcttgatctttacggttattccgtgatcacgctggacaatggt
tttctgaaagtggttcgctcagctaatgtaaaaacatcgccagggatgattgctgacagt
tctcgtccaggcgtaggtgatgagttggtcacccgaattgtaccgcttgagaacgttcct
gctcgtgacctggcccccctgctccgccagatgatggatgcgggtagcgtcggtaatgtt
gtgcattatgaaccctccaacgttcttattctgaccggtcgtgcctccaccattaataaa
ctgattgaagtcataaagcgcgttgatgtcatcggcacagagaagcagcaaattattcat
ctggaatatgcgtcagcggaagatctcgccgagattcttaatcaattaatcagcgaaagc
cacggtaaaagccagatgccagcactcctctccgcgaagattgtggcggataagcgaacc
aactctcttatcatcagtggaccggaaaaagcacgccagcgcatcacttcattactgaaa
agccttgatgtcgaagagagcgaggaaggaaatacccgggtttattacctgaaatatgct
aaagccacgaatctggtggaagtgctaaccggtgtttccgaaaagctgaaagatgaaaaa
gggaatgcgcgtaagccctcctcttctggcgcgatggataacgtcgccattaccgccgat
gaacagactaactctctggtcattaccgctgaccagtccgtccaggaaaaactcgccacg
gtaattgcgcgtctggacattcgccgtgcacaggtgctggttgaggcaatcatcgttgaa
gttcaggatggaaatggactaaacctcggcgtgcaatgggcgaataaaaacgttggcgca
cagcaatttaccaataccggattaccgatttttaacgctgcgcaaggtgtggctgattat
aaaaagaatggtgggatcaccagcgcgaatcctgcctgggatatgtttagcgcctacaat
ggcatggccgcaggcttcttcaatggcgactggggagtactgcttaccgcgctggccagt
aacaataaaaatgacatcctcgccaccccaagcatcgtaacgctggataataaactcgcg
tccttcaacgtggggcaggatgtgccggtgctatccgggtcacagaccacttcaggggat
aacgtctttaataccgtcgaacgcaaaacggtggggacaaaactcaaagttactccgcag
gtcaatgaaggcgacgcggtgttgctcgaaatagagcaggaagtctccagcgttgactct
tcctctaactcgacgctcggcccgacgtttaatacccgtactattcaaaacgccgtgctg
gtcaaaaccggtgaaacggtggtcctgggcggattgctggatgatttttctaaagagcaa
gtgtcaaaggttcctctgcttggcgatattcctttagtggggcaactcttccgctatacc
tccaccgagcgcgctaaacgcaacctgatggtatttatccgtccgacgattatccgtgac
gatgatgtttatcgctcactgtcaaaagagaaatacacccgttaccgtcaggagcaacaa
cagcggatcgacgggaaatcaaaagcgctggttggctcggaagatttgccggtgctggat
gaaaacacgttcaacagtcacgcccctgcgccatcgtcacggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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