| T number | T02001 |
| Org_code | eun |
| Name | Escherichia coli UMNK88 (ETEC, porcine) |
| Annotation | yes |
| Taxonomy | TAX: 696406 |
| Lineage | Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_000212715.2)
BioProject: 42137 |
| Keywords | Animal pathogen |
| Comment | Isolated in 2007 from a farm in Minnesota.
|
| Chromosome | Circular |
| Sequence | GB: CP002729 |
| Length | 5186416 |
| Plasmid | pUMNK88; Circular |
| Sequence | GB: HQ023862 |
| Length | 160573 |
| Plasmid | pUMNK88_91; Circular |
| Sequence | GB: CP002731 |
| Length | 90868 |
| Plasmid | pUMNK88_K88; Circular |
| Sequence | GB: CP002730 |
| Length | 81883 |
| Plasmid | pUMNK88_Ent; Circular |
| Sequence | GB: CP002732 |
| Length | 81475 |
| Plasmid | pUMNK88_Hly; Circular |
| Sequence | GB: CP002733 |
| Length | 65549 |
| Statistics | Number of nucleotides: 5666764
Number of protein genes: 5608
Number of RNA genes: 118
|
| Created | 2012 |
| Reference | PMID: 22081385 |
| Authors | Shepard SM, Danzeisen JL, Isaacson RE, Seemann T, Achtman M, Johnson TJ |
| Title | Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli. |
| Journal | J Bacteriol 194:395-405 (2012)
DOI: 10.1128/JB.06225-11 |
Escherichia coli UMNK88 (ETEC, porcine)