KEGG   Filimonas lacunae: FLA_6361
Entry
FLA_6361          CDS       T05172                                 
Name
(GenBank) signal recognition particle, subunit Ffh
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fln  Filimonas lacunae
Pathway
fln02024  Quorum sensing
fln03060  Protein export
fln03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FLA_6361
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FLA_6361
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FLA_6361
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fln02044]
    FLA_6361
Enzymes [BR:fln01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FLA_6361
Secretion system [BR:fln02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FLA_6361
  Eukaryotic Sec-SRP protein
   FLA_6361
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW AAA_22 CLP1_P DO-GTPase1 SRPRB AAA_17 CbiA AAA_33 AAA_18 AAA_16 AAA_30 KAP_NTPase nSTAND3 ATP_bind_1 APS_kinase AAA_24 TsaE ATPase AAA_19 ATPase_2 SLFN-g3_helicase LPD22 NACHT AAA_31 MMR_HSR1 KTI12 YqeC NTPase_1 AAA DUF2852 ResIII AAA_28 GTP_EFTU Thymidylate_kin AAA_14
Other DBs
NCBI-ProteinID: BAV10300
UniProt: A0A173MS65
Position
7716496..7717821
AA seq 441 aa
MFQNLSERLESAFKNLKGEARISELNIANTVKDIRRALIDADVNYKIAKEFTDKVKEKAL
GEKVLNAISPGQLMVKIVQDELAELMGGKEADFSITGNPAVILIAGLQGSGKTTFTGKLA
NYLKTKKGKSPLVVAADIYRPAAIDQLTVLAEQIGVDIYAERENTDAVAIVQNAIKEAKA
KNKNVVIIDTAGRLAVDEVMMTEVANIKAAVNPTEILFVVDSMTGQDAVNTAKAFNDRLD
FSGVVLTKLDGDTRGGAALSIQYTVNKPIKFVSSGEKMETLDVFYPERMAQRILGMGDIA
SLVEKAQEQYDEEQARKLEKKIRKNQFDFQDFLDQLQQIKKMGNLKDLMGMIPGVGKAIK
DVDISDDAFKGIEAMINSMTPHERSNPDDITPSRRVRIAKGAGKELSEVNAFMKQFDQMR
QMMKMMNKMPMGRMPGMMGRR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgttccagaacctgtctgagaggttagaaagtgcatttaagaacctgaaaggcgaagcc
cgcatttcagaattgaatattgccaataccgtaaaggatattcgccgtgcattaattgat
gccgacgttaactataagattgccaaggagtttactgataaagtaaaagaaaaagccttg
ggcgaaaaagtgttaaacgctattagtcccggccagttgatggtgaaaattgtgcaggac
gaactggcggagttaatgggaggtaaggaagcggatttttccattaccggcaatccggct
gttatccttattgcaggtttacagggtagtggtaaaaccacttttaccggtaagctggct
aactatctcaaaaccaaaaaaggcaaatcgccattggtggtggcagcagatatttaccgt
ccggcggcgattgaccagctgaccgtactggccgagcaaattggggtagatatttatgcc
gagcgggaaaataccgatgcagtagccattgtacaaaacgcgattaaagaagcgaaagct
aaaaataagaatgtagtcatcatcgatactgccggccgtttagcggtagatgaggtgatg
atgaccgaggtggctaatatcaaggctgccgtaaatcctaccgaaatcctgttcgtggta
gactctatgactggtcaggatgccgtaaacaccgccaaagcctttaacgacaggctggac
tttagtggtgtggtgcttaccaagttagatggcgatacccgcggtggtgcggcgctttct
atccaatacactgttaacaagcccattaagtttgtaagtagtggcgaaaaaatggaaacg
ctggatgtgttttatcctgagaggatggcacagcgtatcctgggcatgggtgatattgcg
tccttagttgagaaggcgcaggagcaatatgacgaagagcaggcccgtaagctggaaaag
aaaatccgcaaaaaccagttcgattttcaggattttctggatcagttgcagcagattaag
aaaatgggtaacctgaaagacctgatgggaatgatccccggcgtaggtaaggccattaaa
gatgtggatatcagcgatgatgcttttaaaggcatagaagcaatgatcaactcaatgact
ccgcacgaacgttctaatcctgacgacattacgccttcccgccgtgtgcgcattgccaag
ggcgctggtaaggagttgagcgaggtaaatgcatttatgaagcagtttgaccagatgcgt
caaatgatgaaaatgatgaataaaatgcccatgggccgtatgcctggtatgatgggcaga
agatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (57)   

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