KEGG   Fervidobacterium pennivorans: Ferpe_0555
Entry
Ferpe_0555        CDS       T01808                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fpe  Fervidobacterium pennivorans
Brite
KEGG Orthology (KO) [BR:fpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fpe02048]
    Ferpe_0555
Enzymes [BR:fpe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Ferpe_0555
Prokaryotic defense system [BR:fpe02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Ferpe_0555
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 SNF2-rel_dom 7TMR-HDED SGS AAA_30
Other DBs
NCBI-ProteinID: AFG34690
UniProt: H9UAZ7
Position
589201..592407
AA seq 1068 aa
MVTKLDEEHYVENPFLFQLKKLGWKIYRQNKDNPEDTKEIISFTSSLEPEYGKSQKFRES
FREVVLEEVLSESLKRINPWIEDDQISEVVRKITTPQSNSLLEANKEIHDLLLENTSVSE
NRKTGEKSPTVKFIDFKNPDNNSFIAISQFKVNITGTEKHIVPDIVLFVNGLPLVVVECK
SPAIADPISEAITQLMRYCNRRGASEGNEKLFWYNLFVVATSNQVAKYGTITSDYEHFVE
WKDPYPFSLSDVNPDGNVTSQQILIHGMLSKENLLDLLHTFTIFKEDPKSKMIKVVARYQ
QFRAVKKMIKRLKEGKTPDEKGGIVWHTQGSGKSLTMMFMVRELYHNPEFGNYKVVFVTD
RKDLEKQLNETSRSVGFTVKLARSIQELKELLKTDTPELVMAMVHKFQERELKSEFPVLN
TSPNILIMIDEAHRTQYKLLGANLRKALPNATKIAFTGTPIEKTEMTFGDYIDKYSIKQA
VEDGVTVEIVYEGRVHNAELSDEEAANAKFEDVFKDADKDTKRMIMGRFTWRAYLEAEEV
IRDKARDMIEHYITHVFPNGLKAQVVAVSRCAAIRYKKALEEALKEKISELEKENNSKID
LETLKKLEVGVVISGAQNDPPEYHPYTDPNDHERIIKSFKLPFDKVDENGINGNVGILVV
QNMLITGFDAPVEQVMYLDNVIKGHNLLQAVARVNRVYKNKSCGFVVDYVGVLKHLKEAL
AIYADEDIDEISQVVRNKAKSVDELKLNHRRIEEFFEKYKIKNWRQNIDECIDILVDEEI
RDEFIALVRQFNRSMDAVLPDPEALKYVHDLKILGFIKESARNRYRDDKLSIKDTSNKIR
GIIEEYLHSQGIDPKIPPTPLFEDKFLEKLHKEPSKARTQELQYAIVEHIEKHWEEDPEL
YERFSDRLKRLLEEYKENWDVLYDELEKLRGEMKKGREVEQTFGLDPKKEMPFFGLLKSE
IFGKKPVSELTDSEIDFLVNTTKDIIEIISREAQNVDFWENAVKQKRLKSHITSQLLKKI
SSSTLKNNDTVSEETVPYMVNSITDIVFGKRNEIAQKLIELAYHHFRK
NT seq 3207 nt   +upstreamnt  +downstreamnt
atggtaactaaattggatgaggagcattatgttgaaaatccattcctctttcagcttaaa
aagcttggatggaagatttatagacaaaacaaagataatcctgaggatacaaaagaaata
atatcgttcacttcttcattagaacctgaatatggtaaaagccaaaaattcagagaaagt
tttagagaagtggtccttgaggaagttttaagtgagtctttaaagagaataaacccatgg
atagaagatgaccaaataagtgaagttgttcgaaaaattacaacaccacagtcaaactct
cttttagaggcaaataaagaaatccatgacttgcttttagagaatacctcggtttctgaa
aatagaaaaacaggagaaaagagcccaactgttaagtttattgattttaaaaacccagac
aataattcattcattgcgatatcacagtttaaagtgaatataacagggactgaaaaacat
attgttcccgatatagttctttttgtaaatggtttgcctcttgtggtggttgaatgcaaa
tctccagcaattgctgacccaatttctgaagcaattactcagcttatgcgctattgtaac
agacgtggtgcaagtgagggaaatgaaaagcttttctggtacaacctatttgtagtagct
acctctaaccaggttgcgaagtatggtacaataacctcagactacgagcactttgttgag
tggaaagacccttatcctttttcactgtcagacgtaaatccagatggaaatgtaacaagc
cagcaaattttgattcatggtatgctttcaaaagaaaaccttcttgatttgcttcataca
tttaccatctttaaagaagatccaaagagcaaaatgattaaggttgttgcaagatatcag
caatttagagcagtaaagaagatgataaaaagactaaaagagggcaaaacaccagacgaa
aaagggggaattgtttggcatactcaaggttccggtaaatctttgacaatgatgtttatg
gttcgagagctttatcacaatcctgagtttggaaactacaaagtcgtttttgtcacagat
agaaaagatcttgaaaagcaattaaatgaaacatcaagaagtgttggatttacagttaag
ttagcaagaagcattcaggagcttaaagaacttttaaaaactgacacacccgaacttgtt
atggctatggttcataaatttcaagagagggaattaaaaagtgaatttcccgtccttaat
acatcacctaatatactaataatgatagatgaagcacacagaacccagtacaagcttctg
ggcgcaaatttaagaaaagctcttccaaatgcaacaaaaatagcatttacaggcacacct
atagaaaagaccgagatgacatttggcgattacatagacaagtacagcataaagcaggca
gttgaagatggtgtgactgttgagattgtatatgaaggaagagtacacaacgcagagctt
tcagacgaagaggcagcaaatgcaaagtttgaagatgttttcaaagacgctgataaagat
acaaaaagaatgataatgggaagatttacatggagagcatatcttgaagctgaagaagtt
atccgtgacaaagcaagagatatgatagagcactatataactcatgtattcccaaatgga
ttaaaagctcaagttgttgcagtatctcgctgtgctgcaataagatataaaaaagcactt
gaagaggctctcaaagaaaagatttctgaattggaaaaagaaaataattcaaaaatagat
ttagaaacattgaaaaagttagaggttggtgtggttatttcaggagctcagaatgaccca
cctgagtatcatccttatactgacccaaatgatcacgaaaggataatcaaaagttttaaa
ctcccatttgacaaagtagatgaaaatggtatcaacggcaatgttggtattttagttgtt
caaaatatgctaataactggttttgatgcacctgtagagcaggttatgtatcttgataat
gtgattaaaggacataacttgctgcaagctgttgcaagggtgaatagagtatacaaaaat
aagtcttgtggttttgttgtagattatgtaggtgttttgaaacatttgaaagaggcactt
gctatttacgcagatgaagatattgacgagatttcacaggtagttcggaacaaagcaaaa
agcgttgatgaattgaagttgaatcaccgcaggattgaagagttctttgaaaaatataag
attaaaaattggcgtcagaatatagacgagtgtattgacattcttgtagatgaagagatt
agagatgaattcatagcacttgtaagacaatttaaccgtagtatggatgcagttcttccc
gacccagaggccttaaaatatgtacatgatttaaaaattctgggttttataaaagaatca
gcaaggaatagatacagagatgacaaactaagtataaaagatacaagtaacaagataagg
gggattattgaagagtatctacattctcaaggtattgatcctaaaataccacccactccg
ctttttgaagacaaatttctcgaaaaacttcacaaggaaccaagtaaagcaaggacacaa
gaacttcaatatgccatcgttgagcatattgagaaacattgggaagaagacccagaactc
tatgaaagattttctgataggttgaaaagactacttgaagaatataaagaaaattgggac
gttttgtatgatgagcttgaaaaattaagaggagagatgaaaaagggaagagaagttgaa
caaacatttggacttgatcctaagaaagaaatgccattctttggtctgctcaaaagtgaa
atatttggtaaaaaacctgtcagtgaactaactgatagcgagatagattttcttgttaac
acgactaaagatattatagaaataataagtagagaggctcagaatgttgatttttgggaa
aatgcagtcaaacaaaagaggcttaaatctcatataacttcacagttgcttaagaaaata
tcatcttctactcttaaaaataatgatactgtaagtgaagagactgtaccttatatggtt
aattctataaccgatattgtattcggcaaaagaaatgaaatagctcaaaaattaatagaa
cttgcttatcatcacttcaggaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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