KEGG   Fragaria vesca (woodland strawberry): 101314182
Entry
101314182         CDS       T02666                                 
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101314182
Enzymes [BR:fve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     101314182
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    101314182
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22 AAA_19 T2SSE Helicase_PWI
Other DBs
NCBI-GeneID: 101314182
NCBI-ProteinID: XP_004299306
Position
LG5:7721412..7741246
AA seq 2081 aa
MLVQLPRLTSSLREPFDVDQAYLQRKLILQNQTKPRQSSSSVDESELARKIVHRWEEASY
ELRQAYKQFIGAVVELIDGEVQSEEFREVALAVYRLFGRPEEEGSVETNFSGKKQEVQML
LGHTVSDANMRKVASLAQELSGMQSSDHGITLVSETPVNGTHDSAEFGADLVFHPPARFF
VDVSLDDGESFCEETAGPSSYYEGSYGDGGLIGLHSATDGRGINLSWLQDACDQITKSST
QLSRDELAMAICRVLDSDKAGDEIAGDLLDLVGDSAFETVQDLISHRKELVDAIHHGLLV
MKSDKSSLTSQPRMPSYGTQVTVQTESERQIDKLRRKEEKRNRRGTEYGTDNDLAGVNFS
SLLQASERKNLFDDLSGLGEGLAVNALPQGTQRKHHKGYEEVLIPPTPGAQMKPGEKLID
IAELDDFAQAAFRGYKSLNRIQSRIYHTVYYTNENILVCAPTGAGKTNIAMISILHEIGQ
HFKDGFLHKDEFKIVYVAPMKALAAEVTSTFSQRLSPLNMTVRELTGDMQLSKNELEETQ
MIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQS
MIRIVGLSATLPNYLEVAQFLRVNPEAGLFYFDSSYRPVPLAQQYIGITETNYPAKLELL
NEICYKKVVESLRQGHQAMVFVHSRKDTAKTAQKLVELARKFEGLELFKNDQHPLFSLKQ
RDVVKSRNKDLVELFEFGLGIHNAGMLRSDRVLTERLFSDGLLKVLVCTATLAWGVNLPA
HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLL
TSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIAWEEV
MADPSLSLKQRSLIADAARDLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNE
MLKRHMNETEVIDMVAHSSEFQNIVVREEEQNELEMLVRKLCPLEVKGGPSNKHGKISIL
IQVYISRGSIDTFSLVSDAQYISASLARIMRALFEICLRKGWSEMTLFMLEYCKAVDRQV
WPHQHPFRQFDRDISPQIIRNLEERGADLDRLYDMEEKEIGKLVNYGPGGRKVKQHLGYF
PWIQLAATVSPITRTVLKVDLLITPDFIWKDQFHGTAQRWWILVEDSENDHIYHSELFTL
TKRMAKGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEAFYTISFHNLALPEAHTSHTE
LLDLKPLPVTSLGNSTYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAEL
AMLHLFNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDYTPDLMAILSA
DIIISTPEKWDGISRNWHSRTYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
REVRFVGLSTALANAGDLADWLGVGETGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPSYAAICTHSPTKPVLIFVSSRRQTRLTALDIIQYAASDEHPRQFLSIPEEELQMVLY
QVADSNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEFFDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLREQLHNHINAEIVSGTICHKEDALHYLTWTYLFRRLMFNPAYYGLENTDAEVLS
SYLSSLVQNTLEDLEDSGCIKMSEDSVEPMMLGSIASQYYLSYLTVSMFGSNIGSDTSLE
VFLHILSAASEYDELPVRHNEENYNAVLSERVRCKVDKDRLDDPHVKANLLFQAHFSQLE
LPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSVTCMHLLQMVMQGLWFDEDSSLW
MLPCMNAELADSLCKRGIFRVQQLLELPKATLQNMIGNFPASKFFQDLQLFPRIEVKLKI
LWKEGGESCSLNIRLMKTNFRKHKSRAFTPRFPKVKNEAWWLVLGNTATSELYALKRVSF
SDHLVTNMELPSDSTTLQGMKLMVVSDSYLGFEQEHSISEL
NT seq 6246 nt   +upstreamnt  +downstreamnt
atgttggttcagcttccgcgattgacaagctctctgagggagcccttcgacgtcgaccag
gcctatctgcagcgcaagctcatccttcaaaaccagaccaagcctcgccaatcatcgagc
tcagtcgatgagtcggagcttgcgcgaaagatagttcatagatgggaggaagcttcgtat
gagctgcggcaagcttacaagcagtttattggagctgtggtggagctgatagatggagaa
gttcaatccgaagagtttcgcgaggtggcactcgccgtgtaccggctttttggcaggcca
gaggaggaaggcagtgttgaaactaatttttctggaaaaaagcaggaagtgcaaatgctt
ttgggtcacacagtctcagatgccaacatgcggaaagttgcgtctctagctcaggaactt
tctgggatgcagtctagtgatcatgggattacacttgtttcagaaacgcccgtgaatgga
actcatgacagtgcagaatttggtgccgacctggtttttcatccaccagctcggtttttt
gtagatgtttctttggatgatggggagtcattttgtgaggaaacagctggaccctcctct
tactatgaaggatcatatggtgatggtggcttgatcggtcttcattctgctactgatggg
cgcggcatcaatctgagttggctacaagatgcatgtgatcagataacaaaaagttctaca
cagctttctcgagatgaactggcgatggccatatgtcgggtgcttgattctgacaaagct
ggtgacgagatagcaggtgacttgttggatcttgtgggggatagtgcgtttgaaaccgtt
caagacctcatatcacatcgaaaggaacttgttgatgcgatccatcatgggttactagta
atgaaatctgacaagtcttctttgacctcacaacctcgcatgcctagttatggcacacag
gtgactgttcaaacagaatctgaacggcagattgataagcttcggcgcaaagaggaaaag
cgaaatagacgaggcacagaatatggcactgataatgatctggctggtgttaatttttct
tctctactacaagcaagtgaaagaaaaaatctttttgatgatctatcggggctcggtgaa
ggactagctgttaatgctcttcctcaaggaactcagaggaagcaccataaggggtatgag
gaggttctaatccctccaacaccaggagcacaaatgaaacctggagaaaagctgattgat
atagcggagttagatgactttgctcaagctgcttttcgtggatacaaatctttgaaccgc
attcagagccgcatatatcatactgtttattatacaaatgagaatatactagtttgtgct
ccaacaggagctggcaagacaaacatagctatgatttccattctacacgagattggacag
cacttcaaagatggtttcttgcacaaagatgagtttaagatagtttatgttgcacctatg
aaggcgttagcagcagaagtcacatcaacttttagccaacgattatctccattgaatatg
actgtgagagaacttactggagatatgcaactttctaagaatgagcttgaagaaactcag
atgatagttacaacacctgagaaatgggatgtaattacacgcaagagcagtgacatgtca
ctttcaatgctggtgaagctcctaataattgatgaagttcatctattgaatgatgataga
ggccctgttattgaggcactagttgctcggactttacgccaggtggagtcttcacagtca
atgatacgcattgttggactatccgccactctacccaactatttggaggttgcacagttt
ctgagagtgaatccagaggcaggactcttctactttgattctagctaccgtccagtgccc
cttgcacagcagtacattggcattactgagacaaactatccagccaaacttgaattgttg
aatgagatatgctacaagaaggttgttgagtcactaaggcaaggtcatcaggcaatggtg
tttgtccattctcgaaaggacacggcaaaaacagctcagaagctggttgaacttgctcgc
aaatttgaaggactggagctctttaagaatgatcagcacccactgttttcattgaaacag
agggatgttgtcaaatccagaaacaaagatcttgttgaactttttgaattcggacttggg
attcataatgctgggatgttacgttctgatagagttctgactgagcgccttttctctgat
ggactattgaaggtacttgtttgtacagcaactttggcatggggagtaaatctaccagct
cacactgtggtgataaaggggacccaattatatgatccaaaggctggtgggtggcgagac
cttggaatgcttgatgttatgcagatatttggacgggctgggagacctcaattcgataaa
agcggtgaaggcattataatcacgtctcatgacaaactggcctactatctgcggttactg
acgagtcaacttcctattgaaagtcagttcattagttccttgaaggacaatttaaatgct
gaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatggcttggatataca
tatctttttataagaatgaggcttaaccctttggcgtatggtatcgcgtgggaggaggta
atggcagatccttccttgagtttaaagcagagatcactcatagcagatgctgcgcgggat
cttgacaaagcaaaaatgatgcggtttgacgagaaaagcggaaatttttattgtacagag
cttggtcgcatagcaagccacttttatattcaatattctagtgttgaaacttacaatgaa
atgttgaagcgtcacatgaatgagactgaggtaattgacatggtagcccactcctcggaa
tttcagaatattgttgttcgagaagaggaacaaaatgagcttgagatgttggtgcggaaa
ttatgtccactagaagttaagggtggtccttcaaataaacatggaaagatttccattctc
attcaggtgtacatatctagaggctcaattgataccttttctttggtttctgatgctcaa
tatataagtgcaagcttggcacgtattatgcgggccttatttgagatttgtttgcgaaaa
ggctggagtgagatgacattgttcatgttggaatattgcaaagcagtggaccgccaagtt
tggccccatcaacatcctttcagacaatttgacagggatatctcaccacaaataatccga
aatcttgaggaacgaggggctgatcttgatcgcctatatgacatggaggaaaaagagatt
ggaaaactggtcaattatgggcctggaggaaggaaggttaagcaacatttgggatacttt
ccatggatccagttagctgcaaccgtaagtccaattaccagaactgttttaaaggtggac
ttgcttattacgccagacttcatatggaaagatcaatttcacggcactgcccagcgttgg
tggattctagttgaggattctgagaatgatcatatctaccactcagagctgttcactctg
acaaagcggatggctaaaggggaacctcagaagctctcgttcactgtaccaatatttgag
ccacatccaccacagtattatattcgtgctgtttctgattcttggttgcaagcagaggca
ttctacaccatttctttccataatttagcactcccagaggcccatacttcacatacagaa
ctgctagatctgaagcctctccctgtgacatctcttggaaacagtacttatgaagcattg
tacaaattctcacattttaatccgatacaaacacagactttccatgtgctgtatcacaca
gacaataatgtattactgggagctccaactggaagtggaaaaactatttctgccgagctt
gctatgcttcatctcttcaacacccagcctgatatgaaggtcatttacatagcacccttg
aaagctattgttcgagaaagaatgaatgattggaggaagcgccttgtctctcagcttggg
aagaaaatggttgaaatgacaggagattatactccagatttgatggccatcttgtcagca
gatatcataatatcaactcctgagaaatgggatggtatcagtcgtaattggcatagccga
acctatgttaaaaaggttgggcttatgattttggatgagattcacttgttgggagctgac
cgtgggcctatcctcgaggttattgtgtcaaggatgcgatacatatcctcacagacagag
cgtgaagtacggtttgtagggctttctacggctctggcaaatgcaggagatttggctgat
tggttgggtgtcggagaaactggactcttcaattttaaaccaagtgtgagacctgtaccc
cttgaagttcatatccagggatatccaggaaagttctattgtccaaggatgaatagcatg
aacaaaccatcgtatgctgctatatgcacccattcaccaacaaaaccggttctaattttt
gtttcatcacgtcgccagacaagacttactgcattggacatcattcagtatgcagcttcg
gatgaacatccaaggcagtttcttagtataccagaagaagagctccagatggttctttat
caggttgctgatagtaacctgaggcacaccttgcaatttggcattggattacaccatgct
ggtctgaatgacaaagatagatccctggttgaggagctttttgcaaacaacaagattcag
gtattggtttgtactagcacattggcatggggtgtaaaccttccagcgcatctggttatt
ataaagggaacagaattttttgatgggaaaacaaagagatatgttgacttcccaatcaca
gatatcttgcaaatgatgggtcgtgcaggtcgcccacaatttgatcaacacgggaaagct
gtcattcttgttcatgaacccaaaaagagcttctataaaaagtttttatatgaaccattt
cccgtcgagagtagtctgagggaacagctgcataatcacatcaatgcagagatagtttct
ggtacaatttgccataaagaggatgcattgcattatctgacatggacatatttattccgc
agactgatgtttaatcccgcttactatggcttggaaaatactgacgccgaagttttaagt
tcttatttgtctagcttagtgcagaacacattggaggatctggaagacagtggatgcatc
aagatgagtgaggacagtgtggagccaatgatgctgggttcgatagcatcccagtattac
cttagctacttgaccgtatcaatgtttggttcaaacattggctctgatacctcgcttgaa
gtattcttgcatatcctatctgctgcttctgaatatgatgaacttcctgttcgccataac
gaggaaaattacaatgcggtgctgtcagagagagttcgatgtaaagtggataaggatcga
ctagatgatccacatgtcaaagcaaatctgctgtttcaggcacatttctctcagctagaa
ttaccaattagtgactatgtcacagacttgaagtcagttttggatcaaagtatacggatt
atccaggctatgatagatatatgtgccaacagcggttggctttcaagttcagttacatgc
atgcatcttctgcagatggtcatgcagggcttatggtttgatgaggattcttctttatgg
atgttgccctgcatgaatgctgaacttgctgactcactctgcaaacgaggaatattccgt
gtacagcagctattggaacttcccaaggcaactttgcagaacatgattggaaacttccct
gcttcaaaattctttcaggatctgcagctgtttccacgaatcgaagtaaagttgaaaatt
ttatggaaagagggtggagaatcttgctctttaaacatcagattgatgaagaccaatttc
agaaaacataaatcaagagcctttactccacgcttccctaaggtgaaaaatgaagcatgg
tggttggtgcttgggaacaccgcaacgtcggaactatatgctctgaagagagtatctttc
tctgatcacttggttactaacatggagttaccatcagattcaaccactctccaggggatg
aaactgatggtagtatcagattcttatctggggttcgaacaagagcattcaatatcagaa
ctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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