KEGG   Gossypium arboreum (tree cotton): 108470723
Entry
108470723         CDS       T05776                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1-like isoform X1
  KO
K12191  charged multivesicular body protein 2A
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108470723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108470723
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108470723
Membrane trafficking [BR:gab04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108470723
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108470723
  Exosomal proteins of other body fluids (saliva and urine)
   108470723
  Exosomal proteins of colorectal cancer cells
   108470723
SSDB
Motif
Pfam: Snf7 DMAP1 FerA PspA_IM30 hDGE_amylase Com_YlbF
Other DBs
NCBI-GeneID: 108470723
NCBI-ProteinID: XP_017627646
Position
4:82019667..82022276
AA seq 175 aa
MSFLFGNRNTPAGMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTK
AMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVIGDAIDDALEGDEEEEETEELVSQVL
DEIGIDINQELVNAPSAAVAAPTANGKIAQVQATGNDDSGIDSDLQARLDNLRRM
NT seq 528 nt   +upstreamnt  +downstreamnt
atgagtttcctgtttggcaatagaaatacccctgcagggatggcaaaagaccttatccgg
acacgccatcagattgaaaagttttataagctcaaatcacagctccagggtgtatctctt
agaattcaaacattgaaatcaacacaagcaatgggagaggcaatgaaaggtgtgacaaag
gcaatggggcaaatgaacagacagatgaacttgccatccctgcagaaaattatgcaagag
tttgaaagacagaatgagaaaatggagatggtgagtgaggtgattggtgatgcaatcgat
gatgctttggaaggggatgaagaagaggaggaaacagaagaattggtgagccaggttctt
gacgagattggaattgacatcaaccaagagctcgtaaatgcaccatcagctgctgttgcg
gcaccaactgcaaatggtaagattgcacaggtgcaagcaactggcaatgatgacagtggg
atagatagtgacttacaggcaaggttagacaatttgagaaggatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system