KEGG   Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0416
Entry
GbCGDNIH4_0416    CDS       T03156                                 
Name
(GenBank) DNA mismatch repair protein mutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
gbs  Granulibacter bethesdensis CGDNIH4
Pathway
gbs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gbs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    GbCGDNIH4_0416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbs03400]
    GbCGDNIH4_0416
DNA repair and recombination proteins [BR:gbs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     GbCGDNIH4_0416
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_30 AAA_29
Other DBs
NCBI-ProteinID: AHJ64809
Position
complement(475337..478135)
AA seq 932 aa
MLRHLCMLAETMGAITLHCMSVASTPTRRGRPPGSSAARASNGAGSETAAAIPAGATPAM
AQWFVLKNQHPDALLFFRMGDFYELFFQDAENAAATLDIQLTKRGLHEGEPIPMCGVPVH
AAEMYLSRLIRRGWRVAIVEQMENPKNRAGKGPIRRDVVRLVTPGTITEETLLDAGRPNL
LLAIAQSGNHLGAAWLDISTGLFETESLDESGLTALLGRLDPAEILCPSSLHLEIWDARR
GPEQPVSDPANARVRLAEAYDVSHINVFGSFTDAEAMAAMQALDYVRDAQMGALPRLSHP
VPVGEAGRLAMDASTRASLEIDRARDGGTERTLLSAVQRTLTPAGGRMLAAWLGAPLTDR
TVITARQDGWGWLLEQPTLSMRLRETLRGCPDMARALGRIALGRGTPRDLAAIRDGAHIA
MEAAGLLEGILPSALAELHAALHLPSDLPEMLEAALADPVPARIEDGGVIASGFDGELDA
ERGLRDDSRKIIAALQTEYAQRYGVASLKIRHHAQLGYMIEVPAVAVETLRTVPELILRQ
GMANGARFTHPDLSELDRRITEAAERARQREMIVITALRQKVEAHSSSIAACAEALARLD
VLQSAARLAENGTWCRPVMTDDQTLTIEAGRHPVVEAALEGGPNPFMPNDTDLSASRRVM
LLTGPNMAGKSTYLRQNALIVILAQAGLPVPARAAHIGIVDRLFSRVGASDDLARGQSTF
MVEMTETAAILHQAGPRSLVVVDEIGRGTSTLDGLAIAWAVLEALHSRIGARTIFATHFH
ELARLQGELPMLRPCTMKVQEWRGKVVFLHEVAEGAGGRSWGVHVAKLAGVPAATVRRAG
QLLTALEERSAGLTDNATLPLFAASHGNETETEPAEGIHEAKPASLPQELIEALGQMEPD
KLTPREALDLIYHFKSMLSSQAHNGDVEAESW
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgctccgccatctctgcatgctggccgaaacaatgggagccattacactgcattgcatg
tccgttgcatcgactcccacacgccggggccgtccccccggaagcagtgccgcccgtgcc
tccaacggggccggcagtgaaacggctgccgccattccggcaggcgccacacccgccatg
gcgcaatggttcgtcctgaaaaaccagcatcccgatgcgctgctgtttttccgcatgggc
gatttctacgaactgttttttcaggatgcggaaaatgcagccgccacgctggatattcag
ctgacgaagcgcggactgcatgaaggcgaaccgattcccatgtgtggcgtgccggtccat
gccgccgagatgtatctgtcccgactgatccgccgcggttggcgggttgccattgtcgag
cagatggaaaaccccaaaaaccgcgccgggaagggcccgatccgccgcgatgtcgtacgt
ctggtcacccccggtaccattaccgaggaaactttgctggatgcgggccgtcccaatctg
ctgctggccattgcgcagtccgggaatcatctgggggcagcctggctggatatctccacc
gggttgttcgagacggaatcgctggacgaatccggcctgaccgccctgctgggccggctc
gatccggcggaaattctctgcccctcttccctgcatctggaaatatgggatgcacggcgc
ggaccggaacaaccggtaagcgacccggccaatgcaagggtacgactcgctgaagcatac
gatgtcagccatatcaacgtattcggcagctttaccgatgccgaggccatggcggccatg
caggcgctggattacgtgcgggatgcacagatgggggctttgcctcgcctcagtcatccc
gtgccggtgggcgaggccgggcgactggccatggatgcctccacccgcgccagtctggag
atcgaccgcgcccgcgatggcggcaccgaacgcacgttgctgtccgctgttcagcgcacc
ctgaccccggctggcggcagaatgctcgccgcatggctgggtgctcccttgaccgaccga
acagtcatcaccgcccgacaggatggatggggctggctgctggaacagccgactttgtcc
atgcgcctgcgggaaacgctacgcggctgccccgatatggcccgcgcgctggggcgtatc
gcgctgggacgcggcacgcctcgcgatctggccgccattcgcgatggtgcacacattgcc
atggaggccgccggattgctggaaggcatcctgccctccgcactggctgaattacacgcc
gccctgcatctgccatccgatctgccggagatgctggaggcggcgctcgccgatccagta
cccgctcgcatcgaggatggcggcgtgatcgccagcggcttcgacggtgaactggatgcc
gaacgcgggctgcgggatgacagccgcaagatcatcgccgcacttcagaccgaatacgcc
caacgttatggcgtcgccagcctcaagatccgtcatcacgcgcagctcggctacatgatc
gaagtgcctgccgtagcggtagaaacactgcggacggtgccggagttgatcctgcggcaa
ggcatggccaacggggcacgctttacccatccggacctgtcggagctggaccgccgcatt
accgaggccgccgaacgcgcccggcaacgggaaatgatcgtcatcaccgccctgcggcaa
aaggtggaggcccattccagttccatcgccgcctgcgccgaagcgctggcccgtctggac
gtgctgcaatccgctgcccgtctggcggaaaacggcacatggtgccgccccgtcatgacc
gatgaccagacgctgactatcgaggccggacgccatcccgtggtggaagcagccctggaa
ggcggtcccaacccctttatgcccaacgatacggatctgtccgccagcagacgcgtcatg
ctgctgaccgggccgaatatggcgggcaaatccacctatctgcggcagaacgccctgatt
gtcattctggcgcaggcgggactaccggttccggccagagcagcccatatcggtattgta
gatcgcctgttcagccgggtcggcgcgtcggatgatctggcacgcgggcaatcgactttc
atggtcgaaatgactgaaaccgccgccattctgcatcaggcgggtccccgttccctggtc
gtcgtcgatgaaatcgggcgtggtacctccaccctggatggcctggccatcgcctgggca
gtactggaagccctgcatagccgtatcggcgcacgcacgattttcgctacccatttccac
gaactggcgcgcctgcaaggggaattgccgatgctgcgcccctgcacaatgaaagtgcag
gaatggcgcggtaaggtcgtgtttctgcatgaagtggcggaaggggccggaggacgaagc
tggggtgtccatgtcgcgaaactggccggtgtgcctgccgccaccgtccgcagggccgga
cagttgctcacggcactggaggaacgttccgccgggctgaccgataacgcgactctgccc
ctgttcgccgccagccatggcaacgaaacagagacagagccggcagaaggcattcatgaa
gcaaaacccgcctctctaccgcaagaattgatcgaggcactgggtcagatggaaccggat
aaactcaccccacgcgaagcactcgatcttatatatcattttaagtctatgctttcttcg
caggcgcacaacggcgatgtagaagcggaatcatggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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