KEGG   Geobacter sp. M18: GM18_1168
Entry
GM18_1168         CDS       T01421                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
geb  Geobacter sp. M18
Pathway
geb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:geb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GM18_1168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:geb03019]
    GM18_1168
   03016 Transfer RNA biogenesis [BR:geb03016]
    GM18_1168
Enzymes [BR:geb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GM18_1168
Messenger RNA biogenesis [BR:geb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GM18_1168
Transfer RNA biogenesis [BR:geb03016]
 Prokaryotic type
  tRNA degradation factors
   GM18_1168
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 DUF5403
Other DBs
NCBI-ProteinID: ADW12642
UniProt: E8WMY7
Position
1418312..1420402
AA seq 696 aa
MVHTVQTECCGKTITIETGKIAKQASGAVMIKSGDTMVLVTAVAMKSAKEGQGFFPLTVN
YQEKAYAGGRIPGSFFKREGRPSDNETLTCRLIDRPIRPLFPEGFLNDTQVMATVVSADK
DHDPGILAMIGASAALMVSDVPFAGPIAGVKVGRVDGVFIANPSAEQEEQSDMEIVIAAS
KDAILMVEGSASEVSENDLLEAIFFGKQAVQGILAAQEELVAKVAPVKRNIPAPVVNTDL
KARVDALAKEEMRGAVRIKTKVERHDAIDAITVKTVAALAEEFEGSEKDVKAFIEELEYD
LVREHIIKDGERIDGRDTKTIRNIATEVGLLPRAHGSALFTRGETQSIVAATLGTSVDEQ
RIDSLYGDSRKKFLLHYNFPPYSVGETSFRLAPGRREIGHGMLAERALQQVLPKHDDFPY
TIRIVSDITESNGSSSMATVCGGSLSMMDAGIPIKAPVAGIAMGLIKEGDDFAILSDILG
DEDHLGDMDFKVAGTAEGVTALQMDIKIGGVTREIMSAALAQAKAGRVHILGEMAKTIAT
SRGDLSAFAPRITTIWVKVDKIRDVIGSGGKNIRSVTEATGVAIDIDDTGKINIASTNKE
ACDLAIKMIRNLTAEAEEGKLYMGTVKKIMEFGAFVEIFPGTDGLVHVSELDTERVKNVS
DILKEGDKVLVKCIGIDKQGKIKLSRKEALGQTFTE
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggtacacaccgtacaaaccgagtgctgtggcaagacgattacaatcgaaacaggaaag
atagcgaagcaggcaagcggcgccgtcatgatcaaaagcggcgacaccatggtgctggtc
accgccgtcgccatgaaatcggccaaggaagggcagggcttcttcccgcttaccgtcaac
taccaggaaaaggcatacgcaggcggccggattcccggctccttcttcaagcgcgagggg
cgtccctccgacaacgaaaccctcacctgccgtctcatcgaccgcccgatccgtccgctg
ttcccggaagggttcctgaacgatacccaggtgatggccaccgtggtctccgctgacaag
gaccacgatccgggcatcctcgccatgatcggcgcttccgccgccctcatggtctccgac
gttcccttcgccggcccgatcgccggcgtgaaggttgggcgcgtggacggcgtgttcatc
gccaacccgagtgccgagcaggaagagcagagcgacatggagatcgtcatcgcggcctcc
aaggacgccatcctgatggtcgaaggctccgcttccgaggtctccgagaacgacctcctc
gaagcgatcttcttcggcaagcaagccgttcagggcatcctcgccgctcaggaagagctg
gttgccaaggtcgcgcctgtcaaacgcaacatcccggcgccggtcgtcaacaccgatctc
aaggcccgcgtggatgcccttgccaaggaagagatgaggggtgcggtccgcatcaagacc
aaggtggagcgtcacgatgcgatcgacgccatcaccgtgaagaccgtggcggccctcgcc
gaggagttcgaaggttccgagaaggacgtgaaagcgtttatcgaggagctcgagtacgac
ctggtgcgcgagcacatcatcaaggacggcgagcgcatcgacggccgcgacaccaagacc
atccgtaacatcgcgaccgaagtaggcttgctgccgcgcgcccacggttccgccctgttc
acccgcggcgagacccagtccatcgtggccgccaccctgggcacctcggtcgacgagcag
cgcatcgactcgctctacggcgattcccgcaagaagttcctgctgcactacaacttcccg
ccgtactccgtcggcgagaccagcttccgcctcgccccggggcgccgcgaaatcggccac
ggcatgctcgcagagcgcgccctgcagcaggtgctcccgaagcacgacgacttcccctac
accatcaggatcgtctccgacatcaccgagagtaacggctcctcctcgatggccaccgtc
tgcggcggctccctctccatgatggacgccggcatcccgatcaaggcaccggtcgccggt
atcgccatgggcctcatcaaggaaggtgacgacttcgccatcctttccgatatcctgggc
gacgaagaccacctgggcgacatggacttcaaggtggccggtaccgccgaaggggtcacc
gcgctgcagatggacatcaagatcggcggcgtgacccgcgagatcatgagcgccgccctg
gcacaggccaaggcaggcagggtccacattctgggcgagatggcgaaaaccattgccacc
tcgcgcggcgacctctccgccttcgccccgcgcatcaccaccatctgggtcaaggtcgac
aagatccgcgacgtcatcggctccggcggcaagaacatcaggagcgtcaccgaggcgacc
ggcgttgccatcgacatcgatgacaccggcaagatcaacatcgcctccaccaacaaggaa
gcctgcgacctcgccatcaagatgatccgcaacctcaccgcagaggctgaggaagggaag
ctctacatgggcaccgtcaagaagatcatggagttcggcgcgttcgtcgagatcttcccg
ggaaccgacggcctggtccacgtctccgagctcgacaccgagcgcgtcaagaacgtgagc
gacatcctcaaggaaggggacaaggtgctggtgaagtgcatcggcatcgacaagcagggc
aagatcaagctctcccgcaaagaggccctgggccagactttcaccgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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