KEGG   Geobacter sp. M21: GM21_0195
Entry
GM21_0195         CDS       T00933                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
gem  Geobacter sp. M21
Pathway
gem03030  DNA replication
gem03430  Mismatch repair
gem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GM21_0195
   03430 Mismatch repair
    GM21_0195
   03440 Homologous recombination
    GM21_0195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gem03032]
    GM21_0195
   03400 DNA repair and recombination proteins [BR:gem03400]
    GM21_0195
Enzymes [BR:gem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GM21_0195
DNA replication proteins [BR:gem03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GM21_0195
DNA repair and recombination proteins [BR:gem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GM21_0195
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 AAA_2 AAA_30 AAA_14 PIF1 AAA_16 ResIII AAA_18 Mg_chelatase DUF815 AAA_19 DUF3646 Glyco_tranf_2_5 nSTAND3 DEAD AAA_24 T2SSE
Other DBs
NCBI-ProteinID: ACT16280
UniProt: C6E8Z1
Position
complement(232317..234056)
AA seq 579 aa
MSYLVLARKWRPQTFSDLVGQEHVSQTLKNAIDGGRVAHAFLFTGARGVGKTSSARILAK
ALNCESGLTVEPCNTCSTCLEITEGNSVDVFEIDGASNTGVDDIRELRDNIKYLPSRSRY
KIFIIDEVHMLTTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFKRIAL
PRIVSRLRYIVDQEGVQVSDEALAVVARKGDGSMRDSLSTLDQVLAFCGNQVADADVAAL
LGVVDRRLIMDGCRAVLSKEVRCALQIVAQVDSFGYSMRQFCRELIDQFRNVAILKAIGE
PGDLLELSEAELGELRTLADCASGPDLQRHLTLLLKAEGEMAHASFPRLVLEMTMMRMAT
LAPAVAVQELLSRLDALESGAPAAPRPLRQEGAPRAAAPPVQAPPAARDQHAARPAAMPP
ASPPQPPPAPQAASAAADGGSAELWGSFVQFVKGKRPMLGTELEQVYPVQVSRQLLEIGC
LNGTFELKRMQDPERVTELKELAKAHFGQAPAVRITVLSAPPKDAPPSLSEKKSLESAER
QATLMREAEEHPLVAAAVALFDGEIAEVKEIPGKDVIQS
NT seq 1740 nt   +upstreamnt  +downstreamnt
ttgtcctatctcgtactcgctagaaaatggcgcccccagaccttcagcgatctggtcggc
caggagcatgtcagtcagaccctgaaaaacgccatcgacggggggcgggtagcacacgcc
ttcctcttcaccggggcccgcggggtggggaagaccagctcggcgcgcatcctcgccaag
gcgctcaactgcgagagcgggttgaccgtggagccgtgcaatacctgctccacctgcctg
gagatcaccgaggggaactcggtcgacgtcttcgagatcgacggcgcctccaacaccggc
gtggacgacatcagggagttgcgcgacaacatcaagtacctcccgtcgcgctcgcgctac
aagattttcatcatcgacgaagtccacatgctcaccaccaacgccttcaacgccctgttg
aagacgctggaagagccccccccgcacgtcaagttcatcttcgccaccaccgaacctcac
aaggtccccatcaccatcctgtcgcgctgccagcgcttcgacttcaagaggatcgcgctg
ccgcgcatcgtctccaggctgcgctacatcgtggaccaggagggggtgcaggtctccgac
gaggcgcttgccgttgtggccagaaagggggacgggagcatgcgcgactcgctctccacg
ctggaccaggtgttggccttctgcggcaaccaggtcgcggatgccgatgtcgccgcactt
ctgggcgtggtggaccgccgcctgatcatggacggctgccgcgccgtgctttcgaaggag
gtgcgctgcgcgctgcagatcgtggcgcaggtggattccttcggttacagcatgaggcag
ttctgccgcgagctgatcgaccagttccgcaacgtggccatcctgaaggcgatcggcgaa
ccgggggacctcttggaactctccgaggcggagcttggcgagctgcgcaccctggcggat
tgcgcttcggggcccgacctccagcggcacctgacgctgctcctgaaggccgagggggag
atggcgcatgcgagcttcccgcgcctggtgctggaaatgaccatgatgaggatggcgaca
ctggcgcctgcggtcgcggtgcaggaactcctctcccggctcgacgcgctggaatccgga
gcgcccgcggctccgcgcccgctccgccaggagggcgccccgcgcgccgccgccccgccg
gtccaggcgccccccgcggcacgggaccagcacgccgcgcgccccgccgccatgcctccc
gcttcgccaccccagcccccccctgccccgcaggcagcctcggcagccgccgacggaggg
agcgccgagctttggggaagcttcgtgcagttcgtcaaggggaagcgccccatgctcggc
accgagctggagcaggtttacccggtccaggtctcccggcaactgctggagatcggctgc
ctgaacggaaccttcgagcttaagaggatgcaggacccggagcgggtgactgagcttaag
gagctagccaaggcccatttcggccaagccccggcggtgaggataacggtgttgagcgcc
cccccgaaggacgcgcctccgagcctgtcggaaaaaaaaagccttgaaagcgcagagcgc
caggcaaccctgatgcgcgaggcggaggagcacccgctggtggccgcggcggtggcgctg
ttcgacggggagatcgccgaagtgaaggaaattcccggcaaggacgtcatacaatcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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