KEGG   Gossypium hirsutum (upland cotton): 107886206
Entry
107886206         CDS       T04793                                 
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1-like
  KO
K12489  Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107886206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107886206
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107886206
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    107886206
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    107886206
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107886206
SSDB
Motif
Pfam: BAR_3 ArfGap Ank_2 Ank_5 Ank_4 Ank PH Ank_3 BAR PH_8 PH_11 BAR_2 PH_20 PH_13
Other DBs
NCBI-GeneID: 107886206
NCBI-ProteinID: XP_016665567
UniProt: A0A1U8HHH9
Position
A03:13458994..13473773
AA seq 798 aa
MQFTKLEDTPMLRQEMQCLEENAELMRGRCLKFYKGCRKYTEGLVEGYAGDLAFVNALET
FGGEQNDPICVAFGGPVMTNFTVALREIASYKEVLRSQIEHMLNDRLLQFVNIDLQDIKD
ARKPFDKASLTYDQAREKFLSLRKSTRTDVAAAIEEELHTAKTSFELARFNLVSTLSKFE
AKKRFEFLEAVSGMMDAHLRFFKQGYELLHKMEPFINQVLAYAQQSRECSNYEQESLCER
MQEHIRQIDRESKQLSNAGLPAADGMQPFTRGSQKVIEAVMESAAKGKVQTIRQGYLSKR
SSNLRGDWKRRFFVLDSRGMLYYYRKPFAWSSAAGSPSTIQRSSSENGPGLLSRWLSSHN
HSAVPDEKSVTRHTVNLLTSTIKFDADQTDLMFCFRIISPTKIYTLQAENALDQRDWIEK
ITGVITSLLSSQTPEKCLSAFRAGSGDYFTSDNSSLVAYPDGYPMSIGQYKCKNLSPGSL
LDIPRSSQHQEYCGKSEKPIDILRKVAGNHKCADCGAPEPDWASLNLGLLICIECSGVHR
NLGVHISKVRSLTLDVKVWEPSVLDLFQSLGNIYVNSIWEELLHSGPTRTVIPAGSSNSE
GHKQLVKMKPTHDDPISVKELFIHAKYAEKAFVPKITDKRRLHSVAEEVWESVRSNDPRA
VYRYIVCYGADVNTIYGHASYFDSLDPSSRSLNSLNKNEDQIEKEHPDSCSLLHLACLTT
DICMVELLLQYGANINASDSRGRMPLHICVIGRNFAIAKLLLTRGADPHAVDGEGHTPIQ
LALASGVDDHEDLPFLTE
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgcagttcaccaaactcgaagatacaccgatgcttcggcaagagatgcaatgcttggaa
gagaacgccgagttgatgcgaggaagatgtttaaagttttataaaggatgtcgaaaatac
acagaggggcttgtagaggggtatgctggtgaccttgctttcgtaaatgcccttgaaact
tttggaggggagcaaaatgatcctatatgtgttgcttttggaggcccagtcatgacaaat
ttcactgttgcattaagagaaattgcctcatacaaggaagttcttcgctcacagatagag
cacatgctaaatgataggttgctgcagtttgtcaatatcgatctgcaagatatcaaggat
gcccgaaaacctttcgacaaggcttcacttacatatgatcaggcacgagagaagtttctg
tctttaaggaaaagcactaggactgatgtagctgcagccatagaggaggaattgcatact
gctaaaacctcatttgagctagcccgcttcaatctggttagtactctctccaagtttgaa
gccaaaaagagatttgaatttttggaggctgttagtgggatgatggatgctcacctacgg
ttcttcaaacagggatatgaactcttacataagatggaacctttcattaaccaggtctta
gcttacgcacaacagtctagggagtgttcgaactatgagcaagaatctctatgtgaaagg
atgcaagaacatattaggcagatagatcgagaaagtaaacagttaagcaatgctggtctt
cctgcagccgatggaatgcaaccttttacaaggggatcccaaaaagttattgaggcagtt
atggaatctgctgcgaagggaaaggttcaaaccatacgacaaggttatctttcaaaacgt
tcttcaaacctaagaggtgattggaagagaagattttttgttctcgatagtcgcgggatg
ctgtactactatcgtaaaccatttgcctggtcttctgcagctggaagtccgtctactatt
caaaggagtagttctgaaaatggtcctgggctgctgagccgatggctttcttctcataac
catagtgctgtacctgatgaaaaatctgttacccgccatacagtaaacttgttgacatca
acaatcaagtttgacgcagatcaaacagatttaatgttttgtttcagaattatctcacct
acaaaaatttatacattgcaggcagaaaatgcactagaccaaagggattggattgaaaaa
ataactggagtgattacttccttactgagttcccaaacacctgagaagtgtctctctgct
ttccgcgccggaagtggtgattactttactagtgataacagttcactagtagcgtaccct
gatggttatccgatgtcaattggacaatataaatgtaagaatctctcacctggaagtctt
ttagacatacctagaagttcgcagcatcaagaatattgcggaaagagtgaaaagccaatt
gatatcttaagaaaagtagccgggaatcataaatgtgctgattgtggtgcacctgagcca
gactgggcatctttaaaccttggtctacttatatgcattgaatgttccggagttcaccgc
aatcttggtgtacatatatcaaaggtaagatcactgacacttgatgttaaagtgtgggaa
ccgtctgtgttggatttgtttcaatcactgggaaatatctatgtgaactcaatctgggag
gagttgttgcactcgggacctacaagaactgttatacctgcgggttcttccaactctgaa
ggacataagcaacttgtgaaaatgaaacctactcacgatgatcccatttcagtgaaggag
ttgttcattcatgcaaagtatgcagagaaagcttttgttcctaagataacagacaaacgg
cgtctccactctgtagcagaagaggtgtgggaaagtgttcgttctaatgacccaagggct
gtataccgctacattgtttgctatggggctgatgtgaatacaatttatggtcatgcatca
tattttgactctctggacccctcatcaagatctttgaactcgttaaataaaaacgaagat
cagatcgagaaggagcatcccgacagttgttcactacttcatcttgcctgcttaaccacc
gatatctgcatggtggagctgctgcttcagtatggagcaaatataaatgcgtccgattca
agaggtcggatgccactccatatttgtgtcattggcaggaattttgcaatagcaaaattg
cttcttacaaggggagcagatccacatgctgtagacggagaaggtcacactcctattcag
cttgcattagcatcaggtgttgatgatcatgaggatttgccattcttaacagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system