KEGG   Gossypium hirsutum (upland cotton): 107898631
Entry
107898631         CDS       T04793                                 
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00730  Thiamine metabolism
ghi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    107898631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107898631
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     107898631
Ribosome biogenesis [BR:ghi03009]
 Prokaryotic type
  GTPases
   107898631
SSDB
Motif
Pfam: RsgA_GTPase ABC_tran MMR_HSR1 AAA_29 nSTAND1 AAA_23 AAA_16 AAA_21 AAA_22 Guanylate_kin AAA_18 Roc
Other DBs
NCBI-GeneID: 107898631
NCBI-ProteinID: XP_016679627
UniProt: A0A1U8INC1
Position
D04:57008054..57012552
AA seq 481 aa
MPITSFSLFRSRLPAITTVLRRHSPPYRHLFILSAKQTPSNSRQNVSKKPQPNKNLLKAK
HTFKDYSSLAPVLAPNETPSLSDSQAVGAVAAAQANFMRVIVQREPEDGMKTGLELLCVV
RAVLKKIKRRVLVGDKVVVGSIDWVERRGVIENVFQRSSEIVDPPVANVDRLLVLFSMEQ
PPVEPFMLTRFLVEAESYRIPLTLALNKTELVDEETLFAWKNRLRSWGYEPVFCSVETKN
GLDSLAFYLRDQTTVIVGPSGVGKSSLINVLRSDHRTPDSLEGDNLFDPISGSKWFEDQR
VGEVSTRSGRGKHTTRHVSLLPLLGGGYVADTPGFNQPSLLKVTKQSLAQAFPEIRKMLK
DSEPAKCSFNDCLHLGEPGCIVKGDWERYPYYFQLLDEIRIREEFQLRTFGTKREGDVRY
KVGDMGVQQAEPRLEPKKHRRQSRKRINQSLLDELDELEDDDDSLDLENDPIVRAIENEN
Q
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgccaatcacttctttttcactgttccgcagccgtttacccgccataaccaccgttctc
cgccgtcactcaccaccctaccgccacctctttatcctctccgccaaacagaccccttct
aattcaagacaaaacgtatccaagaaaccccaacccaacaagaacctcctcaaggctaaa
cacaccttcaaagattactcctctttagctcccgtccttgcccctaatgaaactccatct
ctttccgattctcaagccgtcggcgccgttgccgctgctcaagccaatttcatgcgggtc
atagttcaacgggaaccggaggatggtatgaaaactgggttggagttgctttgtgtggtg
agggcagttttgaagaagataaagaggagggttttggttggggataaggtggtggttggt
tcgattgattgggtggaacggcgtggggttattgagaatgtgtttcaacggagttctgag
attgttgatccgccggttgctaatgttgatcgcttgctcgtgcttttctctatggaacag
ccgccggtggagccgtttatgcttacgagattcttggttgaagctgagtcttataggatt
ccactcacgcttgctttgaacaaaacggaactcgttgatgaagagactcttttcgcatgg
aagaataggctgcgaagctggggatatgaaccggtcttttgcagtgttgagaccaaaaac
ggacttgattctcttgcattttacttgagggatcaaacaactgtaattgttggtcctagt
ggggttgggaaatcaagccttatcaatgttctccgaagtgatcaccgcactcctgattcc
cttgaaggagataatttgtttgatcctatttcaggcagcaagtggtttgaagatcagagg
gttggggaggtctcaacaagaagtggcagagggaaacacactacgcgacatgtttcgttg
cttccactattgggagggggctatgttgccgatactccggggtttaatcaacctagcttg
ttgaaagtgacaaagcaatctcttgcacaagctttccccgagattcggaaaatgctaaaa
gacagtgaacctgcaaaatgctcattcaatgattgcttacatcttggtgaacctgggtgc
attgtgaaaggggattgggaaagatatccatactatttccaacttctcgatgagatccgg
atcagagaggaatttcagttgaggacattcgggaccaagagagaaggtgatgtcaggtac
aaagtgggagatatgggtgttcagcaagctgaacctcgattggaaccgaagaaacatcga
aggcaatcgcggaaaaggattaaccagtcgttattagatgaattagatgaacttgaggat
gatgatgatagcttagacttagaaaatgacccaattgttagagcaatagagaatgaaaac
cagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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