KEGG   Gossypium hirsutum (upland cotton): 107960013
Entry
107960013         CDS       T04793                                 
Name
(RefSeq) transcription initiation factor IIA large subunit
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107960013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107960013
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     107960013
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 107960013
NCBI-ProteinID: XP_016751701
UniProt: A0A1U8PKI5
Position
A07:complement(17684437..17688532)
AA seq 390 aa
MASTTTSSVYINVIEDVINKVREEFINNGGPGEAVLNELQGIWEAKMMQAGVILGPIERS
SQKQPTPGSAITPVHDLNVPYEGTEEYETPTADMLFPPTPLQTPVPTPLPGSADGSMYNI
PTGGSDYPTPVNDNGSNADIKGGRPSPYMQSPSPWSNQRTPLSVDVNVAYVEGREEVDRG
TSNQPLTQDFFMMSSGKRKREDFAQYQNGGYIPQQDGAGDATSEVAKAEGSRGGNFLDRR
HSTTTAKSKILAELSKSSSKIPQLDGPIPDPYEDMLSTPNIYNYQGVVNEDYNVVNTPAP
NDLQASTPAPAPQNDIVDDDDDEPLNEDDDEDDLDDVDQGEELNTQHLVLAQFDKVTRTK
SRWKCTLKDGIMHINNKDILFNKATGEFDF
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggcctcgaccacaacgagttcggtttacatcaacgtcatcgaagatgtcatcaacaag
gttcgtgaagagttcatcaacaacggtggacccggcgaagctgtcctcaacgaactccaa
ggaatttgggaagcgaagatgatgcaagcgggagtaatattgggtccgatagagaggtct
tcgcagaaacagcctactcctggtagcgcaattactcctgtgcacgatcttaatgttcct
tatgaagggacggaggaatacgaaactcctacagctgatatgcttttccctccgactcca
ttgcaaacgccagttcctacaccactgccgggtagtgcggatggttctatgtataacatc
cctactggaggtagtgattatcctactcccgtgaatgataatggcagtaatgctgacata
aaaggtggaaggccaagcccgtatatgcaatctccttctccttggtcaaatcaaaggacc
ccactaagtgttgatgttaatgttgcttatgtggaagggcgggaggaggtggacagggga
acctctaatcaacccctgacacaggacttctttatgatgtcatctggaaagagaaaacgt
gaggattttgcacaataccaaaatggtggatatataccccaacaagatggagctggagat
gctacatctgaagttgcaaaggcagagggaagtaggggtggtaatttcctggatagacgt
cactcaacaaccactgcaaaaagcaagatcttggcagagttatctaagtcatcatcaaag
attcctcaactggatggtccaattcctgatccgtacgaagacatgctttctactcccaat
atatacaattatcaaggagttgttaatgaggactacaatgtggtgaacacaccagctcca
aatgaccttcaggcttcaacacctgcccctgctccccaaaatgatatagtagatgatgac
gatgatgaaccattgaatgaagatgatgatgaagatgatttggatgatgtggaccaggga
gaggagctgaacacacaacatctagttttggctcaatttgacaaggtgactcgtacaaag
agccgatggaagtgcacacttaaggatggcatcatgcatataaacaataaagacattctc
tttaataaggcaacaggcgaatttgatttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system