KEGG   Glycine max (soybean): 100795032
Entry
100795032         CDS       T01710                                 
Name
(RefSeq) eukaryotic initiation factor 4A-3
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
gmx03015  mRNA surveillance pathway
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100795032
  09122 Translation
   03013 Nucleocytoplasmic transport
    100795032
   03015 mRNA surveillance pathway
    100795032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100795032
   03041 Spliceosome [BR:gmx03041]
    100795032
   03009 Ribosome biogenesis [BR:gmx03009]
    100795032
   03012 Translation factors [BR:gmx03012]
    100795032
Enzymes [BR:gmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100795032
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100795032
   mRNA cycle factors
    Stress granule specific factors
     100795032
Spliceosome [BR:gmx03041]
 Complex C
  Other components
   EJC/TREX
    100795032
Ribosome biogenesis [BR:gmx03009]
 Eukaryotic type
  90S particles
   Helicases
    100795032
Translation factors [BR:gmx03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100795032
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 TniB
Other DBs
NCBI-GeneID: 100795032
NCBI-ProteinID: XP_003546395
UniProt: A0A0R0GBB6
Position
15:complement(13369297..13373568)
AA seq 406 aa
MATTSVVPANRRRAANPAEEMDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACVGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcaacgacgtcggtggtgccggcgaaccggcgtcgcgcggcgaaccccgcggaggag
atggacttcgagacgacggagggcgtgaaggccatcgcaagcttcgaggagatggggatc
aaggacgatctgctccgcggaatctaccagtacggcttcgagaagccctccgccattcag
cagcgggccgtcacgcccatcattcagggccgtgacgtcatcgctcaggcccaatccgga
acggggaaaacgtccatgattgctctcaccgtttgccaggtcgtcgatacctccgtcaga
gaggttcaggcattgatattgtcaccaacgagggaactggcctcacagactgagaaagtt
atattggctattggggatttcattaatatacaagctcatgcatgcgttggtggtaaaagt
gtgggagaagatataaggaaacttgagtatggagttcatgtggtgtctggaactcctggc
cgagtttgtgacatgatcaaaaggagaacattgcgcacgagagctatcaagatgctagtt
cttgatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccacccgaccttcaggtttgcttgatttctgctacccttcctcatgaaata
ctggagatgacaaacaaattcatgacagatccagtaaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaaacaattttttgttgccgttgaaagggaggaatggaagttt
gataccctgtgtgatctttatgataccctcactatcactcaagctgttatattctgtaac
actaagcgaaaggtggactggttaactgaaaaaatgcgtaacaataatttcactgtctca
tcaatgcatggtgacatgcctcagaaagaaagagatgctattatgggagaatttcgtgct
ggaacaacccgtgtactaataacaactgatgtttgggcccgtggtcttgatgtacagcag
gtttctctagttatcaattatgaccttccaaataatcgtgagctttacattcatcgaatt
ggccgttctggacgttttggaagaaagggtgttgcgataaattttgtgaagagcgatgac
atcaagatcttgagagacattgaacaatactacagtactcagattgatgaaatgccaatg
aatgttgctgatcttatataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system