KEGG   Gluconobacter oxydans 621H: GOX1842
Entry
GOX1842           CDS       T00230                                 
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
gox  Gluconobacter oxydans 621H
Pathway
gox02020  Two-component system
gox02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gox00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GOX1842
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GOX1842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gox03021]
    GOX1842
Transcription machinery [BR:gox03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GOX1842
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR MarR_2 HTH_Crp_2 HTH_24 HTH_Tnp_ISL3 Sigma70_r4 HTH_3 HTH_38
Other DBs
NCBI-ProteinID: AAW61581
UniProt: Q5FPW5
Position
complement(2012841..2014157)
AA seq 438 aa
MLVPGLIQRQSQSLVMTPQLRQAIALLQYTQTDLAQHLRQVCETNPLLILEPGDTVPEAV
PASEDFHDDDPDRFTTASDRPEAAAPPPSDRDELILQIRHSIPPEEQHAAFHLLDSLDET
GRLPVSVTDLAAELGMDAPKLEAIRQTLMHLEPAGLFARSLEECLAAQLRVRNRLDPAMQ
TLLDNLDLLARRDWRRLREKCALDQDDLLDMLAEIQALDPRPGLSLPPPAPPIEPDLIVR
PNGTGFRLTLNTRLLPAVRLDDTLRAQIDGHTEAGRMLLAYAGEATALIRALHSRKQSLL
NVGRAIVQHQAAFLRDGPTALRPLTMREIAERTELHESTISRIVSSKYIDTPRGTVPLKL
FFSTALASEDGTTQSAHAIQHRLQALVAAEGDSVLSDDALTGLLQKEGFSIQRRTVAKYR
EGLGIAKSSQRKRLRRIS
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcttgtcccgggcctaatccagcgtcagtcgcagtctctcgtcatgacgcctcagctg
cgtcaggcgattgcgctgctgcaatacacgcagaccgatctcgcccagcatctccggcag
gtctgcgaaaccaacccactcctcatcctggagcccggcgacacagtccctgaagccgtc
cccgcgtcggaagacttccacgacgacgacccggaccgcttcaccaccgcctccgaccgc
ccggaagcggcagctccgcctccgtccgaccgcgacgagctgatcctccagatccgccac
tccatccccccggaggagcagcacgccgcctttcatctgctggacagtctcgacgaaacc
ggccgcctccccgtctccgttacggaccttgccgccgaactgggcatggacgcaccgaaa
ctcgaagcgatccgccaaactctcatgcatctcgaacccgcaggtctcttcgcccgttca
ctcgaagagtgtctggccgcccagcttcgggtccgtaatcgcctcgatcccgcgatgcag
accctgctcgacaatctggatctgctcgcccggcgggactggcgcagactgcgtgaaaaa
tgcgctctcgatcaggatgacctgctggacatgctggccgagatccaggccctcgatccg
cgccctggcctcagcctgccaccacccgcaccgcctattgaacccgacctgattgtccgt
cccaatggcaccggcttccgcctgaccctcaacacgcgcctgctgccagcagtccggctc
gacgacacactgcgcgcgcagatcgacggccatacggaagctggcagaatgctgctggcc
tacgcaggcgaagcgacggccctcatccgcgcgctccacagtcgcaaacagtcgctcctg
aatgtcggccgcgccatcgtccagcatcaggctgctttcttacgtgacggcccgaccgcg
ctccgccccctgaccatgcgcgaaatcgccgaacgcacggaactgcatgaaagcaccatc
agccgcatcgtcagcagcaaatatatcgatacgccccgcggtactgttccactcaaactg
ttcttctcaaccgccctggcatccgaagacggcaccacccagagcgcccatgccatccag
caccgcctccaggccctggtggccgccgagggcgatagcgtcctgtccgacgacgccctg
acaggcctgctgcaaaaggaaggattttccatccagcgccgtaccgtcgccaaatatcgc
gaaggtcttggtatcgcgaaatccagtcaacgcaagagactgcgccgcatatcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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