KEGG   Gossypium raimondii: 105768910
Entry
105768910         CDS       T04129                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105768910
   03009 Ribosome biogenesis [BR:gra03009]
    105768910
Enzymes [BR:gra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105768910
Spliceosome [BR:gra03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    105768910
Ribosome biogenesis [BR:gra03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    105768910
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 ARTD15_N
Other DBs
NCBI-GeneID: 105768910
NCBI-ProteinID: XP_012444633
UniProt: A0A0D2S4C5
Position
5:complement(15004283..15010465)
AA seq 739 aa
MAPSFMFEAPSDEEPELSESKDEDNEEAEEEEEGDEAEDKPSKPKPKSQSPWDFASYSES
VAEEHARRGTTSVDFKISKILQQSSAPAQQEETSDSESDKQVDYRSEDEDEENSNARDNK
SFFAPAEGASFHANSFMELNLSRPLLRACETLGYTKPTPIQAACIPLALTGRDICGSAIT
GSGKTAAFALPTLERLLFRPKRVSAIRVLILTPARELAVQVHSMIEKLAQYTDIRCCLIV
GGLSLKAQETALRLMPDIVVATPGRMIDHLRNTMSVDLDDLAVLILDEADRLLELGFSAE
IHELVRLCPKRRQTMLFSATMTEEVDELVKLSLTRPLRLSADSSTKRPSTLTEEVVRIRR
MREVNQEAVLLSLCTKTFTSRVIIFSGTKQAAHRLKILFQLAGLQAAELHGDLTQVQRLD
ALERFRKQEVDFLIATDVAARGLDIIGVQTVINYACPRDITSYVHRVGRTARAGREGYAV
TFVTDNDRSLLKAIAKRVGSKLKSRIVAEQSITKWSQKIEEMEEKVTEVIEEERAERALR
KAEMEATKAENMIAHKDEIYARPKRTWFMTEKEKKLVAKEAKASVEKEKGSADAIISAQQ
AEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDQSEINEPDGSGKNKKEKEGISLVDL
AYRRAKAVKAVKKAVDSGKIVKKSNKCSKQYKQRTQSRTEEMRELFENDMSERRQKSSSN
AGRKKPKSSFKSKSRYKRK
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggctccaagcttcatgttcgaagcccccagcgacgaagaacccgaactctctgaatcg
aaggatgaagataatgaagaagctgaggaggaagaagaaggagatgaagcagaagacaaa
ccttccaaaccaaaacccaaatcccaatctccatgggactttgcttcttactctgaatcc
gtcgcagaagaacacgctcgccgtggtaccacctctgttgacttcaaaatctctaaaatc
ctccaacaaagctcagctccagctcagcaggaggagacctccgattctgaatccgacaaa
caagttgattataggtcagaagatgaagatgaggaaaatagcaatgcaagagacaataaa
tcgttctttgcaccagctgaaggagcgtcgtttcatgccaattctttcatggagctcaat
ctttcgcgtcctttgcttcgtgcttgtgaaacattgggttacaccaagcctacgcccatt
caggctgcttgtatacccttagccttgactgggcgcgatatatgtggtagcgcaattact
ggttctgggaagacggctgcatttgccttacctacattagaaaggctgttatttcgtcct
aaaagggtttcagctatacgggtacttatccttactccagctagagagttggccgttcag
gttcacagtatgatagagaaactggcccagtataccgatattagatgctgtctgattgtt
ggtgggctttcattaaaggcacaagagacagctttgagattaatgcctgacattgttgtg
gctactcctggacgcatgatagatcatttacgcaataccatgtctgtggatttggatgat
cttgcagttttgatccttgatgaggcagatcgtcttctggagctcggattcagtgctgaa
attcatgaattggttcgcctttgtcctaaaaggagacagactatgctgttttcagctaca
atgacagaggaagttgatgagcttgtcaagctttctttgaccagacccttgcgtctctca
gctgactcatcaactaaacggccatcaacattgaccgaggaggttgtaaggatacgccga
atgcgtgaagtaaatcaagaagcagttcttctgtcattgtgtacaaagaccttcacatcc
agagtgattatcttcagtggaactaagcaggctgctcataggttgaagattttatttcag
ttggctggccttcaagcagctgagcttcatggagatcttactcaagttcagcgccttgat
gccttggaacgttttaggaagcaggaagttgattttttaattgcaactgatgtggctgct
cgtggacttgatataattggtgttcagactgttattaattatgcttgtcctcgagatatt
acaagttacgttcaccgagtcggtcggacagcaagagctggtagagaaggatatgccgtt
acatttgttactgacaatgaccgatctctattaaaagctattgcaaagagagtaggttca
aagttgaagagccggattgttgcggagcagtctatcactaagtggtcacaaaaaattgag
gagatggaggagaaagtcactgaagttattgaagaggagagggcggagagagccctaaga
aaggctgaaatggaagcaacgaaggctgaaaatatgattgcacataaggatgaaatttat
gcacgacctaaaagaacctggtttatgacagaaaaggagaaaaaacttgtagctaaggaa
gcaaaggcatctgtagagaaagaaaaaggttctgcagatgcaatcatcagtgctcaacaa
gctgaggaccttaagatgaaggaaaagaggaagcgagagcgtgagaaaaatttacctcgg
aagaaacgtcgaaaactggaagctgccagagaaatgttggaggatcaaagcgaaattaat
gaaccagatggtagtgggaaaaataagaaagagaaggaaggtatatctttggttgacttg
gcataccggcgagcaaaagcagtaaaagctgtgaagaaggctgtagattctggcaaaatt
gtgaagaaatccaataaatgctcaaagcagtataaacaaagaactcaatcaaggacagag
gaaatgcgggagctattcgaaaatgacatgagtgagagaagacagaaaagttctagtaat
gccggaaggaaaaagcccaaaagttcatttaagagcaaatcacgttacaagcgcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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