KEGG   Gossypium raimondii: 105792332
Entry
105792332         CDS       T04129                                 
Name
(RefSeq) CLIP-associated protein
  KO
K16578  CLIP-associating protein 1/2
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gra03036]
    105792332
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gra04812]
    105792332
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     105792332
Cytoskeleton proteins [BR:gra04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      105792332
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG XMAP215_CLASP_TOG HEAT HEAT_EZ Vac14_Fab1_bd HEAT_2 Adaptin_N PDS5 Cnd1 MMS19_C Maestro_HEAT UTP20_C Tti2 Sec7-like_HUS Dopey_N Rif1_N V-ATPase_H_N IFRD Npa1 DUF3385 SEN1_N
Other DBs
NCBI-GeneID: 105792332
NCBI-ProteinID: XP_012476310
UniProt: A0A0D2R911
Position
8:56147604..56158195
AA seq 1435 aa
MEEALELARAKDTKVRMAAVERLYQLLEGTRKNLTSSEVTSIVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDGKQPVRDAARHLLVTLMEVSSPTIIVE
RAGSYAWRHKSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLSDPNLGVREAAI
LCIEEMYRQAGTQFRDELHRHQLPASMVRDINARLEKIEPQVRSSDGILGGFGSGEMKPA
ILNPKKSSPRAKSSSRESSLFAGESDITEKPIDPIKVYSEKELIREFEKISSTLVPEKDW
SVRIAAMQRVEGLVFGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRN
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFNKT
WPDRSRRLFSSFDPAIQRIINEEDGGMHRRHASPSLRDRNVQMSFTTRTSSTSNIPGYGT
SAIVAMDRTSSLSSGTSFSSGMNLSQSKPLGKGAERTLESVLHASKQKVSAIESMLRGLD
ISEKQRSTSLDLGVEPPSSRDPPFPAVVPASHSLTSSLGLESSTSGVGKGSNRNGGLIMS
DIISQIQASKDSGKLSYRSTVATESLPTFSSYSAKRASERQDRGSFEENSDIREARRLTN
PHIEGQYLEMPYRDVSSRDSHNNYIPNFQRPLLRKHVAGRMSAGRRRSFDDNQLSLGEMS
NYVEGPASLNDALSEGLSPSSDWSARVAAFSYLRSLLKQGPRGIQEVVQTFEKVMKLFFQ
HLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEI
VSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAVNPEGSGNIGILKLWLAK
LTPLAHDKNTKLKDAAITCIISVYTHFDPTAVLNFILSLSVEEQNSLRRALKQYTPRIEV
DLINFLQNKKERQRSKSSYDPYDVVGTSSEEGYIGVSKKSAFLGRYSSSSIDSEGGRKWG
TTQESTLITGSIGLATSDETRENLYQNFETSPNADVLLSKTNESSYMVYSMSQNLGSRNL
ESNFNLEGVSTPQLEINGLSRSDSLGAIGGVAHNYETSSGLDLNHLKPAAVKINSMPDAG
PSIPQILHMICNGNDESPTASKRSALEQLTEISAANDPSIWNKYFNQILTAILEVLDDSD
SSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNEAEHCLNTVLSQYD
PFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPSLFEAFGNQSAD
VRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDANQ
NT seq 4308 nt   +upstreamnt  +downstreamnt
atggaggaggcattggagctggcacgtgccaaagacaccaaggtgcgaatggcggcggtg
gaacggctttaccaactcctcgaaggtactagaaagaatctcacttcttcggaagtcact
tcgatagttgactgctgcttggatctcctcaaggacaacaacttcagagtctcccagggt
gctctccaggcacttgcttccgcggccgttctatccggtgatcacttgaagttgcacttt
aatgcgctcgttcccgcggttgttgaacggttaggtgacggcaaacagcctgttagggat
gctgctagacatttactggtcactctcatggaggtttcttctccaactattatcgtcgaa
agagctggctcttatgcctggagacacaaaagttggagagttcgggaggagtttgcccgg
accgtgacatctgcaataagtctttttgcatctactgaacttccacttcaacgggctatt
cttccacctattttgcagatgttaagtgacccaaatcttggtgttcgtgaagctgctata
ttgtgcattgaggaaatgtataggcaggctggtacccaattccgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatatcaatgctagactagagaaaattgagcca
caagttagatcttcagatggaattttgggtggttttggttctggagagatgaagcctgca
atccttaaccccaagaaaagcagtccaagagccaagagttcttcgagggagtcatctctt
tttgcaggtgaaagtgatatcacagaaaaacccatagatccgattaaagtttactcagag
aaggagctgataagggaatttgagaaaatttcttctactcttgtgccggaaaaagattgg
tctgtacgcattgctgccatgcagagggttgaaggccttgtttttggaggagctgctgat
tatccatgtttccggggactcttaaagcagcttgttggccccctaagtacacaattatca
gatagaaggtcaagcattgtgaagcaggcttgccatttattatcattcttatcgaaggag
ctattgggagattttgaggcatgtgctgagatcttcattccagtccttttcaagttggtt
gtgattactgtgcttgtaattgcagagtctgctgataattgcataaaaacgatgttgcgt
aactgcaaagttgctcgtgtacttcctcgcatagctgattgtgcaaagaacgaccgtaat
gctgtactccgtgccaggtgctgtgaatatgcattgttgatacttgaacattggccagat
gcacctgaaatacagcgatcggctgatttatatgaggatctgattagatgttgtgttgct
gatgcaatgagtgaggtaagatcaactgctagaatgtgctatagaatgttcaacaaaact
tggccagatcgttctcgtcgcttgttctcctcctttgatcctgccattcaaaggataatt
aatgaagaagatggagggatgcataggcggcatgcttctccttctctccgtgacaggaat
gtacagatgtcatttaccactcgaacttcttctacttcaaatatacctggatatggaaca
tctgctatagttgcaatggacagaacttccagtttatcttcagggacgtccttttcttct
gggatgaatttatcccagtcaaagccccttggtaaaggtgctgagcgtactctggagagt
gtattgcatgcaagcaaacagaaagtgagtgccatcgaaagtatgcttagaggtctggac
atttccgaaaaacagaggtcaacaagcttggatctaggagttgagcctccatcatctcgt
gatccaccattccctgctgttgttccagcttctcacagtctcacaagctctttaggacta
gaatcaagtacctctggtgtcggtaagggtagtaaccgtaacggtggtctgatcatgtct
gacatcatttctcaaattcaagcttccaaagactcgggcaagttatcatatagaagtact
gtggcaacagagtctctgccaactttctcatcatactcggccaagagggcatctgaaaga
caagatcgtggttcctttgaagagaatagtgacatcagggaggccaggcggcttacaaat
ccacatattgaagggcaatatttggaaatgccatacagagatgtaagctctagggattca
cataacaattacattcctaacttccaaaggccgcttttgagaaagcatgtagctgggcgt
atgtctgctggaaggagaagaagttttgatgataaccagctgtcacttggagagatgtca
aattatgttgaaggtccagcttctctcaatgatgccttaagtgagggacttagtcctagt
tctgattggtctgcaagggttgctgctttttcttatctccggtctttgttgaagcaaggc
ccaagaggtattcaggaagtggttcaaacttttgagaaggtaatgaaactgtttttccag
cacttggatgacccccaccataaagttgcacaggctgccctttcaactcttgcagatatt
attccatcatgccgaaagccctttgagagttacatggaaaggatcttaccccatgttttc
tcacgcttaattgatcccaaggagttggttaggcaaccttgctcaacgacattggaaata
gtaagtaagacttatagcatagattctctcttacctgctttgctgcgttcactggatgaa
cagcggtcgccaaaggcaaaattggctgttattgagtttgccattagttccttcaacaag
catgctgtgaatcctgaaggttctggtaacattggcatcctgaagttatggcttgctaag
ttgacgccattggcccatgataaaaatactaagcttaaggatgcagctattacttgcatc
atatctgtatacacgcatttcgatccaaccgctgttctgaattttattcttagtttatca
gttgaagaacaaaattccttgagacgggcacttaagcagtacacacctcgtattgaggtg
gatctaataaactttttgcaaaacaagaaagagagacagcgctctaagtcatcctatgat
ccctatgatgttgtaggaacatcatctgaagaaggatatattggtgtgtccaagaagagt
gctttccttgggaggtattcttccagttccattgatagtgaaggaggtaggaaatggggt
accacccaggaatcaaccctgatcactggcagtattggcctggcaacatctgatgaaact
cgggagaacttatatcagaactttgagaccagtccaaatgcagatgttcttctttctaaa
actaatgaatcatcttatatggtttattccatgagtcagaacttgggatctcgaaacttg
gaaagtaattttaacttggaaggtgtatctactccacaactggaaattaatggtctgagt
agatccgactcattaggggctattggtggggttgctcataattatgagacttcatcaggt
ttagatcttaatcaccttaaaccagcagctgtaaagattaactccatgccagatgctggg
cctagcattcctcaaattcttcacatgatctgcaatgggaatgatgagagccctaccgca
agtaagcgcagtgcacttgagcaattaactgaaatttctgcggctaatgatccctcgatt
tggaacaagtacttcaatcagattttgacagctatacttgaagttttagatgattctgat
tcttcaatcagagaacttgcgctgtcattgatagttgaaatgcttaaaaaccagaaagat
gctatggaagattctgttgaaatagtaattgagaagctgcttcatgtaacaaaggatatt
gttccaaaagtttcaaatgaagctgagcactgcttgaacactgtgctgtctcagtatgat
ccattcagatgtttaagtgtcattgtacctttattagttactgaagatgagaagactcta
gttatttgcataaattgtttaacgaagcttgtgggccggctatcacaggaggaactaatg
gctcaactgccctcatttttgccttctctttttgaagctttcggaaaccagagtgcggat
gtccggaagacggtggttttctgtttggtggatatttatataatgcttgggaaagcattt
ttaccacacttggagggacttaacagcacacagttgcggttagttacaatctatgctaat
cggatttcacaggccaggactggtacccctatagatgctaaccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (33)   

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